Strain Overview | |
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Organism Name | Burkholderia thailandensis ATCC 700388 |
Species | Burkholderia thailandensis |
Strain | ATCC 700388 |
Description/Title | Sample from Burkholderia thailandensis E264 |
Annotated Genes | 5502 |
Partial Genes | 122 |
Host Information | |
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Host Species Taxonomic Name |
Geographic Location |
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Database | Scheme | Sequence Type | Alleles | |
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Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst). |
Assembly | |
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Assembly DB |
RefSeq
|
Assembly Accession | Assembly Status | latest |
Scaffolds | |
Contigs | 44 |
Contig N50 | 381955 |
Assembly Level | Chromosome |
Percent GC |
Cross-References | |
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NCBI BioSample Accession | SAMN02469820 |
NCBI Taxonomy ID | 271848 |
NCBI Bioprojects |
Related Data | |
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Additional Genome Project Info | |
Sequencing Information | |
Genome Assembly Information |
Feature | Count |
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gene | 5502 |
CDS | 5273 |
pseudo | 181 |
tRNA | 37 |
rRNA | 3 |
ncRNA | 1 |
Localization | Count |
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Cytoplasmic | 2232 |
Cytoplasmic Membrane | 1052 |
Periplasmic | 165 |
Outer Membrane | 114 |
Extracellular | 93 |
Unknown | 1587 |
Unknown (This protein may have multiple localization sites) | 144 |
Flagellar | 26 |
Fimbrial | 4 |
Host Associated | 3 |
T3SS | 4 |
Name | Length | GC | |
---|---|---|---|
Burkholderia thailandensis E264 strain ATCC 700388 chromosome 1, whole genome shotgun sequence. | 3453093 bp | 67.0% |
Replicon details
|
Burkholderia thailandensis E264 strain ATCC 700388 chromosome 2, whole genome shotgun sequence. | 2901247 bp | 67.6% |
Replicon details
|
Genomic | ORF DNA | Intergenic | Amino Acid |
TSV | CSV | GBK | EMBL | GFF3 | GFF3 + sequence | GTF |