Burkholderia mallei 092700E

Strain Overview
Organism Name Burkholderia mallei 092700E
Species Burkholderia mallei
Strain 092700E
Description/Title Microbe sample from Burkholderia mallei NCTC 10247
Annotated Genes 5159
Partial Genes 70
Host Information
Host Species Taxonomic Name
Geographic Location
Location Name Turkey: Ankara
Isolation Source unknown
Sample Provider
Name Hajnalka Daligault
E-mail hajkis@lanl.gov
Institution Los Alamos National Laboratory
Date Collected unknown

MLST Data

Database Scheme Sequence Type Alleles
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
Assembly Status latest
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Cross-References
NCBI BioSample Accession SAMN02798191
NCBI Taxonomy ID 320389
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Genome Browsers*
Burkholderia mallei strain 092700E chromosome 1, complete sequence.
Burkholderia mallei strain 092700E chromosome 2, complete sequence.

Annotated Features

Feature Count
gene 5159
CDS 4949
pseudo 143
tRNA 56
rRNA 10
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2246
Cytoplasmic Membrane 973
Periplasmic 158
Outer Membrane 107
Extracellular 73
Unknown 1332
Unknown (This protein may have multiple localization sites) 142
Flagellar 23
Fimbrial 3
Host Associated 2
T3SS 2

Replicons

Name Length GC
Burkholderia mallei strain 092700E chromosome 1, complete sequence. 3476239 bp 68.2%
Replicon details
Burkholderia mallei strain 092700E chromosome 2, complete sequence. 2351417 bp 69.0%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF