Burkholderia mallei A193

Strain Overview
Organism Name Burkholderia mallei A193
Species Burkholderia mallei
Strain A193
Description/Title Pathogen sample from Burkholderia mallei
Annotated Genes 4462
Partial Genes 133
Host Information
Host Species Taxonomic Name
Geographic Location
Location Name France
Isolation Source unknown
Latitude/Longitude unknown
Sample Provider
Name Jason Sahl
E-mail jasonsahl@gmail.com
Institution Translational Genomics Research Institute
Date Collected 1964

MLST Data

Database Scheme Sequence Type Alleles
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
Assembly Status latest
Scaffolds
Contigs 185
Contig N50 53210
Assembly Level Contig
Percent GC
Cross-References
NCBI BioSample Accession SAMN02303032
NCBI Taxonomy ID 1382518
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information

Annotated Features

Feature Count
gene 4462
CDS 4319
pseudo 86
tRNA 51
rRNA 4
ncRNA 2

Subcellular Localization

Localization Count
Cytoplasmic 1877
Cytoplasmic Membrane 895
Periplasmic 149
Outer Membrane 96
Extracellular 66
Unknown 1172
Unknown (This protein may have multiple localization sites) 126
Flagellar 23
Fimbrial 3
Host Associated 2
T3SS 2

Replicons

185 replicons associated with this assembly

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF