Burkholderia cenocepacia 869T2

Strain Overview
Organism Name Burkholderia cenocepacia 869T2
Species Burkholderia cenocepacia
Strain 869T2
Description/Title Microbe sample from Burkholderia cenocepacia
Annotated Genes 7141
Partial Genes 253
Host Information
Host Species Taxonomic Name Chrysopogon zizanioides
Host Species Common Name vetivergrass
Host Species Taxonomy ID 167337
Geographic Location
Location Name Taiwan: Taichung
Isolation Source surface-sterilized vetiver roots
Sample Provider
Name Ying-Ning Ho
E-mail silentboyryan0109@gmail.com
Institution National Chung Hsing University
Date Collected 14-Aug-2007

MLST Data

Database Scheme Sequence Type Alleles
PubMLST bcc -
phaC
~123		 trpB
~45		 recA
144		 atpD
187		 gltB
161		 gyrB
908		 lepA
156
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
GCF_000705535.1
Assembly Status latest
Scaffolds
Contigs 88
Contig N50 291521
Assembly Level Contig
Percent GC
Cross-References
NCBI BioSample Accession SAMN02720836
NCBI Taxonomy ID 95486
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Details

Annotated Features

Feature Count
gene 7141
CDS 7016
tRNA 61
pseudo 53
rRNA 6
ncRNA 2

Subcellular Localization

Localization Count
Cytoplasmic 3058
Cytoplasmic Membrane 1559
Periplasmic 242
Outer Membrane 175
Extracellular 93
Unknown 1683
Unknown (This protein may have multiple localization sites) 213
Flagellar 1

Replicons

83 replicons associated with this assembly

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF