Burkholderia ambifaria MEX-5

Strain Overview
Organism Name Burkholderia ambifaria MEX-5
Species Burkholderia ambifaria
Strain MEX-5
Subspecific Genetic Lineage
Description/Title Generic sample from Burkholderia ambifaria MEX-5
Scaffolds
Contigs 706
Contig N50 20649
Assembly Level Contig
Percent GC
Annotated Genes 7228
References
Partial Genes 1020
Cross-References
NCBI BioSample Accession SAMN00000044
NCBI Biosample ID 44
NCBI Taxonomy ID 396597
GOLD Accession
NCBI Bioprojects
NCBI Sequencing Assay
NCBI Assembly
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information

Annotated Features

Feature Count
gene 7228
CDS 6976
pseudo 193
tRNA 52
rRNA 5
ncRNA 2

Subcellular Localization

Localization Count
Cytoplasmic 2913
Cytoplasmic Membrane 1436
Periplasmic 229
Outer Membrane 160
Extracellular 95
Unknown 1973
Unknown (This protein may have multiple localization sites) 179
Flagellar 4
Sample Provider
Name
E-mail
Institution Joint Genome Institute, U.S. Department of Energy
Date Collected
Geographic Location
Host Information
Host Species Taxonomic Name

Replicons

706 replicons associated with this assembly

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TAB CSV GBK EMBL GFF3 GFF3 + sequence GTF

Download Intergenic Region Annotations

File also contains gene annotations

GTF