Burkholderia ambifaria IOP40-10

Strain Overview
Organism Name Burkholderia ambifaria IOP40-10
Species Burkholderia ambifaria
Strain IOP40-10
Subspecific Genetic Lineage
Description/Title Generic sample from Burkholderia ambifaria IOP40-10
Scaffolds
Contigs 629
Contig N50 24355
Assembly Level Contig
Percent GC
Annotated Genes 7034
References
Partial Genes 861
Cross-References
NCBI BioSample Accession SAMN00000046
NCBI Biosample ID 46
NCBI Taxonomy ID 396596
GOLD Accession
NCBI Bioprojects
NCBI Sequencing Assay
NCBI Assembly
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information

Annotated Features

Feature Count
gene 7034
CDS 6901
pseudo 75
tRNA 54
rRNA 2
ncRNA 2

Subcellular Localization

Localization Count
Cytoplasmic 2951
Cytoplasmic Membrane 1448
Periplasmic 218
Outer Membrane 164
Extracellular 104
Unknown 1836
Unknown (This protein may have multiple localization sites) 196
Flagellar 4
Fimbrial 1
T3SS 1
Sample Provider
Name
E-mail
Institution Joint Genome Institute, U.S. Department of Energy
Date Collected
Geographic Location
Host Information
Host Species Taxonomic Name

Replicons

629 replicons associated with this assembly

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TAB CSV GBK EMBL GFF3 GFF3 + sequence GTF

Download Intergenic Region Annotations

File also contains gene annotations

GTF