Burkholderia acidipaludis NBRC 101816

Strain Overview
Organism Name Burkholderia acidipaludis NBRC 101816
Species Burkholderia acidipaludis
Strain NBRC 101816
Subspecific Genetic Lineage
Description/Title HapMap sample from Homo sapiens
Scaffolds
Contigs 64
Contig N50 204381
Assembly Level Contig
Percent GC
Annotated Genes 5797
References
Partial Genes 285
Cross-References
NCBI BioSample Accession SAMD00000367
NCBI Biosample ID 3324300
NCBI Taxonomy ID 9606
GOLD Accession
NCBI Bioprojects
NCBI Sequencing Assay
NCBI Assembly
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information

Annotated Features

Feature Count
gene 5797
CDS 5705
tRNA 52
pseudo 36
rRNA 3
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2599
Cytoplasmic Membrane 1232
Periplasmic 168
Outer Membrane 126
Extracellular 80
Unknown 1352
Unknown (This protein may have multiple localization sites) 148
Sample Provider
Name
E-mail
Institution National Institute of Technology and Evaluation Biological Resource Center
Date Collected NA
Geographic Location
Location Name Viet Nam
Latitude/Longitude NA
Environmental Feature (?) Water chestnut, Eleocharis dulcis
Environmental Material (?) Water chestnut, Eleocharis dulcis
Host Information
Host Species Taxonomic Name

Replicons

64 replicons associated with this assembly

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TAB CSV GBK EMBL GFF3 GFF3 + sequence GTF

Download Intergenic Region Annotations

File also contains gene annotations

GTF