Burkholderia glumae BGR1

Strain Overview
Organism Name Burkholderia glumae BGR1
Species Burkholderia glumae
Strain BGR1
Subspecific Genetic Lineage
Description/Title Sample from Burkholderia glumae BGR1
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Annotated Genes 6258
References
Partial Genes
Cross-References
NCBI BioSample Accession SAMN02603166
NCBI Biosample ID 2603166
NCBI Taxonomy ID 626418
GOLD Accession
NCBI Bioprojects
NCBI Sequencing Assay
NCBI Assembly
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information

Annotated Features

Feature Count
gene 6303
CDS 5760
tRNA 66
pseudo 34
rRNA 15

Subcellular Localization

Localization Count
Cytoplasmic 2522
Cytoplasmic Membrane 1159
Periplasmic 158
Outer Membrane 115
Extracellular 96
Unknown 1551
Unknown (This protein may have multiple localization sites) 159
Flagellar 26
Fimbrial 5
T3SS 2

Breakdown by COG Category

Feature Count
General function prediction only 564
Amino acid transport and metabolism 421
Function unknown 420
Transcription 417
Cell wall/membrane/envelope biogenesis 328
Carbohydrate transport and metabolism 310
Signal transduction mechanisms 299
Energy production and conversion 298
Replication, recombination and repair 277
Lipid transport and metabolism 206
Coenzyme transport and metabolism 203
Inorganic ion transport and metabolism 201
Translation, ribosomal structure and biogenesis 180
Posttranslational modification, protein turnover, chaperones 169
Cell motility 156
Secondary metabolites biosynthesis, transport and catabolism 155
Intracellular trafficking, secretion, and vesicular transport 146
Nucleotide transport and metabolism 92
Defense mechanisms 51
Cell cycle control, cell division, chromosome partitioning 42
Chromatin structure and dynamics 1
RNA processing and modification 1
Sample Provider
Name
E-mail johnston@ncbi.nlm.nih.gov
Institution NCBI
Date Collected
Geographic Location
Host Information
Host Species Taxonomic Name

Replicons

6 replicons associated with this assembly

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TAB CSV GBK EMBL GFF3 GFF3 + sequence GTF Orthologs

Download Intergenic Region Annotations

File also contains gene annotations

GTF