Burkholderia vietnamiensis G4

Strain Overview
Organism Name Burkholderia vietnamiensis G4
Species Burkholderia vietnamiensis
Strain G4
Subspecific Genetic Lineage
Description/Title Sample from Burkholderia vietnamiensis G4
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Annotated Genes 7639
References
Partial Genes
Cross-References
NCBI BioSample Accession SAMN02598263
NCBI Biosample ID 2598263
NCBI Taxonomy ID 269482
GOLD Accession
NCBI Bioprojects
NCBI Sequencing Assay
NCBI Assembly
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information

Annotated Features

Feature Count
gene 7861
CDS 7605
tRNA 67
pseudo 25
rRNA 18
ncRNA 2
tmRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 3281
Cytoplasmic Membrane 1434
Periplasmic 213
Outer Membrane 130
Extracellular 107
Unknown 2610
Unknown (This protein may have multiple localization sites) 195
Flagellar 24
Fimbrial 13
Host Associated 1
T3SS 2
S-layer 1

Breakdown by COG Category

Feature Count
General function prediction only 640
Amino acid transport and metabolism 557
Transcription 548
Function unknown 505
Replication, recombination and repair 420
Energy production and conversion 365
Cell wall/membrane/envelope biogenesis 349
Signal transduction mechanisms 321
Carbohydrate transport and metabolism 315
Inorganic ion transport and metabolism 284
Lipid transport and metabolism 237
Coenzyme transport and metabolism 201
Translation, ribosomal structure and biogenesis 186
Posttranslational modification, protein turnover, chaperones 184
Intracellular trafficking, secretion, and vesicular transport 174
Secondary metabolites biosynthesis, transport and catabolism 155
Cell motility 122
Nucleotide transport and metabolism 96
Defense mechanisms 59
Cell cycle control, cell division, chromosome partitioning 44
Chromatin structure and dynamics 4
Cytoskeleton 2
Extracellular structures 1
RNA processing and modification 1
Sample Provider
Name
E-mail johnston@ncbi.nlm.nih.gov
Institution NCBI
Date Collected
Geographic Location
Host Information
Host Species Taxonomic Name

Replicons

8 replicons associated with this assembly

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TAB CSV GBK EMBL GFF3 GFF3 + sequence GTF Orthologs

Download Intergenic Region Annotations

File also contains gene annotations

GTF