Burkholderia lata 383

Strain Overview
Organism Name Burkholderia lata 383
Species Burkholderia lata
Strain 383
Subspecific Genetic Lineage
Description/Title Sample from Burkholderia lata
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Annotated Genes 7643
References
Partial Genes 41
Cross-References
NCBI BioSample Accession SAMN02598262
NCBI Biosample ID 2598262
NCBI Taxonomy ID 482957
GOLD Accession
NCBI Bioprojects
NCBI Sequencing Assay
NCBI Assembly
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information

Annotated Features

Feature Count
gene 7643
CDS 7552
tRNA 69
pseudo 57
rRNA 18
misc_RNA 2
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 3364
Cytoplasmic Membrane 1626
Periplasmic 241
Outer Membrane 181
Extracellular 105
Unknown 1814
Unknown (This protein may have multiple localization sites) 224
Flagellar 22
Fimbrial 4

Breakdown by COG Category

Feature Count
General function prediction only 822
Transcription 807
Amino acid transport and metabolism 675
Function unknown 557
Energy production and conversion 486
Carbohydrate transport and metabolism 443
Cell wall/membrane/envelope biogenesis 439
Lipid transport and metabolism 390
Inorganic ion transport and metabolism 322
Signal transduction mechanisms 319
Secondary metabolites biosynthesis, transport and catabolism 266
Coenzyme transport and metabolism 240
Translation, ribosomal structure and biogenesis 207
Posttranslational modification, protein turnover, chaperones 189
Intracellular trafficking, secretion, and vesicular transport 163
Replication, recombination and repair 144
Nucleotide transport and metabolism 117
Cell motility 108
Defense mechanisms 78
Cell cycle control, cell division, chromosome partitioning 38
Chromatin structure and dynamics 4
RNA processing and modification 1
Extracellular structures 1
Sample Provider
Name
E-mail johnston@ncbi.nlm.nih.gov
Institution
Date Collected
Geographic Location
Host Information
Host Species Taxonomic Name

Replicons

Name Length GC
Burkholderia sp. 383, complete sequence. 3587082 bp 66.7%
Replicon details
Burkholderia sp. 383 chromosome 1, complete sequence. 3694126 bp 66.2%
Replicon details
Burkholderia sp. 383 chromosome 3, complete sequence. 1395069 bp 65.3%
Replicon details

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Genomic ORF DNA Intergenic Amino Acid

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TAB CSV GBK EMBL GFF3 GFF3 + sequence GTF Orthologs

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File also contains gene annotations

GTF