Burkholderia lata 383

Strain Overview
Organism Name Burkholderia lata 383
Species Burkholderia lata
Strain 383
Description/Title Sample from Burkholderia lata
Annotated Genes 7643
Partial Genes 41
Host Information
Host Species Taxonomic Name
Geographic Location
Location Name Trinidad
Isolation Source forest soil
Environmental Material (?) soil
Sample Provider
Name Dr A. C. Hayward
E-mail
Institution
Date Collected 1958

MLST Data

Database Scheme Sequence Type Alleles
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
Assembly Status latest
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Cross-References
NCBI BioSample Accession SAMN02598262
NCBI Taxonomy ID 482957
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Genome Browsers*
Burkholderia sp. 383 chromosome 1, complete sequence.
Burkholderia sp. 383, complete sequence.
Burkholderia sp. 383 chromosome 3, complete sequence.

Annotated Features

Feature Count
gene 7643
CDS 7552
tRNA 69
pseudo 57
rRNA 18
misc_RNA 2
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 3364
Cytoplasmic Membrane 1626
Periplasmic 241
Outer Membrane 181
Extracellular 105
Unknown 1814
Unknown (This protein may have multiple localization sites) 224
Flagellar 22
Fimbrial 4

Replicons

Name Length GC
Burkholderia sp. 383 chromosome 1, complete sequence. 3694126 bp 66.2%
Replicon details
Burkholderia sp. 383, complete sequence. 3587082 bp 66.7%
Replicon details
Burkholderia sp. 383 chromosome 3, complete sequence. 1395069 bp 65.3%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF