| Internal ID | 1761248 | Source Database | TransTermHP TERM 1002 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1002
|
| Sequence |
AAAAACCCCCGCGACGCCCTTGCATCGCGGGGGTTTCG Look for more occurrences |
| Start | 3199851 |
| End | 3199888 |
| Strand | + |
| Genomic Context | |
| Replicon | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | ACCCGGCCATCCGTA(5' tail) AAAAACCCCCGCGACGC(5' stem) CCTT(loop) GCATCGCGGGGGTTTCG(3' stem) TTTTTGTGTCGCCGG(3' tail). Confidence: 100. opp_overlap 3199856, overlap 3199856 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685
|