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               Bphy_0007               
Key to diagram


View in GBrowse: (?) 19 putative orthologs Acknowledgements for this annotation
Gene Information
Strain Burkholderia phymatum STM815 (Tax ID: 391038) Replicon Chromosome_1(3170 genes, 3479187 bp) [ RefSeq ]
Gene name   Alternate Gene Names  
Locus tag Bphy_0007 (View 1 update) GenBank Identifier (GI) 186474779 (Precomputed BLAST results at BLINK )
Genomic location 8816 - 10210 (+) Feature type CDS 
Burkholderia Ortholog Group Explanation of Orthologous Groups
Product Information
Product Name Ethanolamine ammonia lyase large subunit
Alternate Product Names
Subcellular localization
Cytoplasmic (Class 3Explanation of Localization Confidence)
Alternate Annotations and Cross-References
RefSeq YP_001856249.1
GI 186474779
Entrez 6241512
GBrowse Click here for a GBrowse View of this and other annotations.
COG Predictions
COG PredictionExplanation of COG predictions
COG Accession Description Category
COG4303 EutB, Ethanolamine ammonia-lyase, large subunit [Amino acid transport and metabolism]. Amino acid transport and metabolism
Pathways
Pathways Explanation of Pathways Field
Name Database Xref
Glycerophospholipid metabolism KEGG bph00564 Computationally Generated
Homology
BLINK Precomputed BLAST results at BLINK
Structure Features
PFAM predictions Explanation of PFAM predictions
Accession Domain Start Stop E-value Release No.
PF06751 EutB, Ethanolamine ammonia lyase large subunit (EutB). 11 444 0.0 23.0
 
Comments
Comments PFAM: Ethanolamine ammonia lyase large subunit; KEGG: bxe:Bxe_A4444 putative ethanolamine ammonia lyase large subunit
Sequence data
Upstream 500 BP Region TGTCGAAGGTGCATCCGCGCTTCAAGACTCCGCATCGCGCGATTCTCGCGGGTGGTGTGGTCGGCATCGCCGCCATTTATAGTGACGAGCTGATCCAGTT CGGCGGCCAGACGCTGACCGCGAATATCGTGACGATGTCGGTATTTGGCGCTATCGTGATGTACATCATCAGCATGCTGGCGCTTTTCAAGTTGCGCCGC ATCGAGCCGAACATGGAGCGTCCGTTCCGCGCGCCGCTGTTTCCGTACTTCCCGGCGTTCGCACTGGTGGCTGCCGTGATTTCGCTGGGCACGATGATCT ACTTCAATCTGCTCGTCGCGCTCGTGTTTGCCGCTTTCCTCGCGCTCGGCTACGGTTATTTCCTGATGACGCGTCATCAACGCGAAGCGGCCCCGGCAGA CGTTTTGCTCGAAGAATGAAGGCAGCGCAGGCATCGCACGCGGCACTGACGCATTGGCAATAGAGCCGCGCGCAGCAGGCGCGGCGATGGAGTACACGAC

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Need more than 500 BP? Try our sequence retrieval tool or view intergenic regions in GBrowse.

DNA Sequence ATGAGCTACATGGAGACAATCGGCAGCCGCACGTATCGTTTTGCCGATCTGAAGTCGCTGATGGCGAAGGCAAGTCCGCTGCGTTCCGGCGATCAGCTCG CCGGCATTGCGGCGGCGAGCGAGGAAGAACGCGTCGCCGCGAAGATGGCGCTGGCGGACGTGCCGTTGCGCACGTTCCTGAACGAGGCGTTGATTCCATA CGAGAGCGATGAAGTCACGCGCCTCGTCATCGATACCCATTCTCCGGAAGCATTCGCGCCGATTGCGCATCTTACCGTCGGGGAATTTCGCAACTGGCTG CTGTCGAGCGAGACGGACACGGACACACTCACGCGCGTCACGAAAGGACTCACGCCCGAAATGGTGGCGGCCGTGTCGAAGCTGATGCGCAATCAGGATC TGATTCTGGCGGCGCGCAAGCGGCCCGTCATCACTCGCTTTCGCAACACCGTCGGCTTGCCGGGACACATGTCCGTTCGACTGCAGCCGAACCATCCGAC CGACGACGTGAAAGGCATCGCTGCATCGATGATCGACGGTCTGATGTACGGTTGCGGCGATGCGATGATCGGCATCAATCCCGCATCGGACAGTCTCTCG GCGATCACGAACCTGCTGCTGATGATCGACGACTTCCGCACCCGCTATCACGTGCCGACGCAATCGTGCGTGCTCACGCATGTGACCAACACGATTTCTG CGATCGAGAAAGGCGCACCCGTCGATCTCGTGTTCCAGTCGATTGCCGGAACAGAAAAAGCCAATGCGGGCTTCGGCATTTCGCTCGCGTTGCTGCAGGA AGCCTACGAGGCGGCGTTGGCGCTCAAGCGCGGCACGGTCGGCGACAACGTGATGTACTTCGAAACAGGGCAGGGCAGTGCGCTGTCGGCGGATGCGCAT CATGGCGTCGATCAGCAGACGTGCGAGGTGCGGGCCTACGCGGTCGCGCGCCACTTCAACCCGTTTCTGGTGAATACGGTGGTCGGCTTTATCGGCCCGG AATACCTTTACGACGGCAAGCAGATCACGCGCGCGGGTCTCGAAGATCACTTCTGCGGCAAGCTGCTCGGCGTGCCGATGGGCTGCGACATCTGCTACAC GAATCACGCGGAAGCCGATCAGGACGACATGGATAATCTGCTGACGCTGCTTGGCGTTGCAGGCATCAACTTCATCATGGGCATTCCCGGCGCCGACGAC GTGATGCTCAACTATCAAAGCACGTCGTTCCATGATGCGCTCTATGTGCGCGAGGTGCTCGGATTGCGCCGCGCACCGGAGTTCGAAGAATGGCTGGAAT CGATGCAGATCACAGACACGCGCGGCGCGCTGCTCAATGCGCCGACGGGTCAGCCATTGCTCGAAGGCGCGAGCGAATGGATGGGCATCGCATGA

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Downstream 500 BP region Click here to view the nucleotide sequence of the region 500 BP downstream of this gene.

Protein Sequence MSYMETIGSRTYRFADLKSLMAKASPLRSGDQLAGIAAASEEERVAAKMALADVPLRTFLNEALIPYESDEVTRLVIDTHSPEAFAPIAHLTVGEFRNWL LSSETDTDTLTRVTKGLTPEMVAAVSKLMRNQDLILAARKRPVITRFRNTVGLPGHMSVRLQPNHPTDDVKGIAASMIDGLMYGCGDAMIGINPASDSLS AITNLLLMIDDFRTRYHVPTQSCVLTHVTNTISAIEKGAPVDLVFQSIAGTEKANAGFGISLALLQEAYEAALALKRGTVGDNVMYFETGQGSALSADAH HGVDQQTCEVRAYAVARHFNPFLVNTVVGFIGPEYLYDGKQITRAGLEDHFCGKLLGVPMGCDICYTNHAEADQDDMDNLLTLLGVAGINFIMGIPGADD VMLNYQSTSFHDALYVREVLGLRRAPEFEEWLESMQITDTRGALLNAPTGQPLLEGASEWMGIA

BLAST search against this genome or other genomes in database
View precomputed BLAST results against all genomes at NCBI BLINK
References
PubMed  
We thank Cystic Fibrosis Foundation Therapeutics, Inc. for critical funding support for the Burkholderia Genome Database.



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Burkholderia Genome Database Version 1.0