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               Bcenmc03_0007               
Key to diagram


View in GBrowse: (?) 0 putative orthologs Acknowledgements for this annotation
Gene Information
Strain Burkholderia cenocepacia MC0-3 (Tax ID: 406425) Replicon Chromosome1(3260 genes, 3532883 bp) [ RefSeq ]
Gene name   Alternate Gene Names  
Locus tag Bcenmc03_0007 (View 1 update) GenBank Identifier (GI) 170731363 (Precomputed BLAST results at BLINK )
Genomic location 11478 - 14372 (+) Feature type CDS 
Burkholderia Ortholog Group Explanation of Orthologous Groups
 
Product Information
Product Name hypothetical protein
Alternate Product Names
Subcellular localization
Cytoplasmic (Class 3Explanation of Localization Confidence)
Alternate Annotations and Cross-References
RefSeq YP_001763310.1
GI 170731363
Entrez 6121691
GBrowse Click here for a GBrowse View of this and other annotations.
COG Predictions
Homology
BLINK Precomputed BLAST results at BLINK
Structure Features
PFAM predictions Explanation of PFAM predictions
Accession Domain Start Stop E-value Release No.
PF10593 Z1, Z1 domain. 439 679 3e-98 23.0
 
Comments
Comments KEGG: har:HEAR1845 hypothetical protein
Sequence data
Upstream 500 BP Region AAATCCACAGCCCGGCCCCCTGTGTCGCTTAAACCCTGGCTCACCCAGTTCGCCGAGAACACGCGCGAGCGCGCTCGCCGAGTGTTCGCCTATCGCGCAA CCCCGACGCCGAGCCAAGGCGACAGGCCCGTTGAACAAGCTTGGCGTGTGGAGCGGCTCAAGGCAGGTATGCGGTATCGAATCGAAGAGAAACATCCCTC CGTCGCGGCCGTCCTCGACAACGCTGGCGATCTCCAACCCTTGATCAAAGCAATGATTCGGGTGATCGAGGAAACGGTCCCGGTCCAGCGCATCTGGCTC GACACCGCCGAGAACAAAGAGACACCGCGCACCGGTTTCGATGGTGAGCCCAACGAGGCGGTGATTGAGATCGCGACCATTCTCTTCGATGACCTGATCC TGCGAAAGAATTTGAGCGTAGACGAGGCCCGCAAGGCACTACTGCGCACCGAACCCTTTCACAAATTTCCCGCGCTCGTGGCGCGGCTTGGGAGTAAACC

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DNA Sequence GTGACCCCGGCAGAAACTGCGGCAGCCCAATTGGAACTGCTCGAGAACGTGATTGCCACCGCACAGCGGTTGGTGAAAGCGGAGAAGGACAAGTCGAAAA TTACGGCAGCCTACATTGCCGAGAAAGTGGCACGAGCTGCGGACATGTTCGAGACTGACGCCACCTCCACTGTCGACCAGTCGTTGGCGGTCTCCACACT CATTCAGCGATTCAGTCACTGGATTGGCAAGGCCACCACGCTCAAAGACGATGCCGGCCATATCCATTGGCTCAATGCCGCCCGCAAGAAAGATTGGCAC TATTGGCGTCGCTACCGCGATTACCTTGAAGCCAAGCTCTCCGACAGGGTCGTGGATGGCCTTGACGACGCAACTGACAACATCTTGGCCCTGCTCGAAG ACCCGCATCGGACAGATGCATGGGATCGCCGAGGGCTTGTCGTCGGCCATGTCCAATCAGGCAAGACCAGCAACTACTCGGGCCTGATCTGCAAGGCGGC AGATGCCGGCTACAAGATCATCATCGTCCTGGCAGGCACGCACAACAATCTGCGCTCCCAAACTCAAATGCGCCTCGAAGAGGGCTTCTTGGGCTACGAA ACGACGGTGAACCGCGACCCCGGCTTGCCCATCGGAGTGGCTGAGTTCGGCGAGGACCTGAAAACGAACTCCGCGACCACGCGCGCAGACAACGGCGACT TCAACAAGGCTATCGCCAAGCATTTCCACGGCATTTCGCCAGAAGAGCGCCCGTGGCTCTTTGTGGTCAAGAAGCAAAAGACGGTGCTTACTGCCCTCCT GAACTGGATTCAGTCGCGCGTGTTCGATGCCACCAAAGACGGCCGGAAAGTCGTCACCAAACTGCCGTTACTAATGATTGACGATGAGGCGGATAACGCA TCTGTCGACACTGGCGAGCAATTGTTCGATGAGGACGGTACTCCCGACGAGGAGCATCAGCCTAAAACTATCAACAGCCTCATTCGGCAGATTCTGCATG CCTTCACTCGTAAGGCATATGTAGGCTACACTGCCACGCCCTTCGCCAATATCTTCATCCACCACAAGGGAACCACTACGAAGGAGGGGCCCGATCTATT CCCGCGCTCCTTCATCATTAACTTGGCCGCGCCGTCGAACTATGTCGGCCCCGCCCGCCTCTTTGGGAGGATGACCAAGGATGGGCGAAAGGGTGAACTT CCACTCAGTCGCGCCATTCTCGACCATTACGATCCTGAGACCGACTCAGGCTGGATGCCGCCAAAACATAAAAAGACGCACGTACCGGTCTACAACGGGC AGGAGATGGCTCCGCCCTCTTTGCGCAAGGCCATCTGCGCCTTCGTCCTTGCTTGCGCAGTGCGCGAACTACGCGGCCAGGGAGCGGCGCACAGCTCTAT GCTGATCCACGTCACGCGCTTTGTGGCAGTGCAGGACCATGTACGGCTCCAGGTCGAGGATTCGGTGCGAAGCATGCGCCAGAAAATCTGCAGAGGCATC GAAGCAGACAGTCTGCTAACTCAGATGAAAGAGCTATGGGAGCTGGACTTCGCTCCGACCAGCGCCAAGGTCTCTGAACTGTCTCCCGACGAAGAGCGGC CTGCAGCATTGCCGACATGGAATGAGGTGCAGGCGGCACTTCCCGATGTCCTCGAAGACATCGAGGTGCGTTCGATCAATGGCACGGCCAAGGACGCTTT AGACTACGCCACTCCAGGCTCGGCACTCAAGGTCATTGCCATTGGCGGTGACAAACTGGCGCGGGGGCTGACGCTCGAAGGACTCTGCGTGAGCTATTTC GTACGCACCACGAAGATGTACGACACGCTTATGCAAATGGGCCGATGGTTTGGTTATCGACCAGGATATTTGGATCTCTGTCGCCTCTACACCTCGCCCG ACTTGGTGCGCTGGTTCGGCCACATCGCTGACGCGTCCGAGGAGCTGCGAGAGGAGTTCGACTTCATGGCCAGCGCGAATCTCACGCCGGAAGATTATGG CCTCAAGGTGATATCCCACGAGGTGCTTACGGTCACGTCGCCCTTGAAGATGCGTAACGCGCATACCCTGTCCTTGACCTATAGCGGAACGCGCCCCCAG ACTATCTTGTTCCACCGCGACTTGAAGACGCAACAAGCCAACCTCTCCGCGACGGACGATTTGATCGCATCCCTTGGACAACCTAACGTCCACGGCCAGA AATTCGAGCGCGATGGCAAAGCCGACTCGTGGCCACGTTCGCGGCTGTGGACGGGGGTTGACGTGTCGAAGGTGCTTGCGTTCTTGGGCGCGTACGCGAC TCACCCCAACGCGACTAGCGCCAAGGCTCCAGTGCTCGCGGAATTCATCCGCAAGATGAATGAGATAGGTCAACTGGATCAGTGGAACGTAGCACTGTTG GCCGAAGGCAGCGACGAGAGCAATCCACACGAATTTCCGGGAGGCATCCGCATCGAGTCCTTCCCGATGCGCACGCCCGACGACCACGGATCGCTCGATC AAAGAGACCTAGCTAATTTCGCCATTGGAGTGTTGACCGATCCGGCCGACGAGGGGATCGATTTGGATGACGACGTTTGGCGCGAGGCTCTCGAAATCAC GCAAGCGGCCTGGAAACAGGACCCGGCACGAGGACGGGTCACCATGCCGACGGTCCCAAGCGGTAAAGGCATGCGCATGGCTCGCGGCAAGCTTGGCGGC GCCGTGGATCGCGGTTTGTTGCTTCTCTATCCGCTCGCGCCATACGCTGGCAAGCCGAAATCCCAAATCGTGCCTGGGTGGAACAAGCCCATTATGGCCT TCGCCATAGCCTTTCCAGCCAGCGACAGCGGAATCAGCGTGGAATATGAAGTGAATGTCCTCTATTGGACTCAGGAATATGGCGCGACTGAGTGA

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Downstream 500 BP region Click here to view the nucleotide sequence of the region 500 BP downstream of this gene.

Protein Sequence MTPAETAAAQLELLENVIATAQRLVKAEKDKSKITAAYIAEKVARAADMFETDATSTVDQSLAVSTLIQRFSHWIGKATTLKDDAGHIHWLNAARKKDWH YWRRYRDYLEAKLSDRVVDGLDDATDNILALLEDPHRTDAWDRRGLVVGHVQSGKTSNYSGLICKAADAGYKIIIVLAGTHNNLRSQTQMRLEEGFLGYE TTVNRDPGLPIGVAEFGEDLKTNSATTRADNGDFNKAIAKHFHGISPEERPWLFVVKKQKTVLTALLNWIQSRVFDATKDGRKVVTKLPLLMIDDEADNA SVDTGEQLFDEDGTPDEEHQPKTINSLIRQILHAFTRKAYVGYTATPFANIFIHHKGTTTKEGPDLFPRSFIINLAAPSNYVGPARLFGRMTKDGRKGEL PLSRAILDHYDPETDSGWMPPKHKKTHVPVYNGQEMAPPSLRKAICAFVLACAVRELRGQGAAHSSMLIHVTRFVAVQDHVRLQVEDSVRSMRQKICRGI EADSLLTQMKELWELDFAPTSAKVSELSPDEERPAALPTWNEVQAALPDVLEDIEVRSINGTAKDALDYATPGSALKVIAIGGDKLARGLTLEGLCVSYF VRTTKMYDTLMQMGRWFGYRPGYLDLCRLYTSPDLVRWFGHIADASEELREEFDFMASANLTPEDYGLKVISHEVLTVTSPLKMRNAHTLSLTYSGTRPQ TILFHRDLKTQQANLSATDDLIASLGQPNVHGQKFERDGKADSWPRSRLWTGVDVSKVLAFLGAYATHPNATSAKAPVLAEFIRKMNEIGQLDQWNVALL AEGSDESNPHEFPGGIRIESFPMRTPDDHGSLDQRDLANFAIGVLTDPADEGIDLDDDVWREALEITQAAWKQDPARGRVTMPTVPSGKGMRMARGKLGG AVDRGLLLLYPLAPYAGKPKSQIVPGWNKPIMAFAIAFPASDSGISVEYEVNVLYWTQEYGATE

BLAST search against this genome or other genomes in database
View precomputed BLAST results against all genomes at NCBI BLINK
Operons/Regulons
Type operon
Genes
GeneProduct
Bcenmc03_0005 RNA polymerase, sigma 32 subunit, RpoH
Bcenmc03_0006 hypothetical protein
Bcenmc03_0007 hypothetical protein
Evidence Computationally Predicted
PubMed 18988623
Cross-Reference DOOR 435090
References
PubMed  
We thank Cystic Fibrosis Foundation Therapeutics, Inc. for critical funding support for the Burkholderia Genome Database.



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Burkholderia Genome Database Version 1.0