Burkholderia Genome Database - Annotation for BMA10229

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BMA10229_0007

Key to diagram

View in GBrowse: (?)

0 putative orthologs

Acknowledgements for this annotation

Overview
Functional Data
Sequence Data
References

Gene Information
Strain	Burkholderia mallei NCTC 10229 (Tax ID: 412022)	Replicon	Chromosome_II(2215 genes, 2284095 bp) [ RefSeq ]
Gene name	rrfA	Alternate Gene Names
Locus tag	BMA10229_0007	GenBank Identifier (GI)	(Precomputed BLAST results at BLINK )
Genomic location	5870 - 5985 (+)	Feature type	rRNA
Burkholderia Ortholog Group
Product Information
Product Name	5S ribosomal RNA
Alternate Product Names
Subcellular localization	No localization assigned and computational localization prediction using PSORTB not performed ()
Alternate Annotations and Cross-References
RefSeq
GI
Entrez	4790491
GBrowse	Click here for a GBrowse View of this and other annotations.

COG Predictions
Homology
BLINK	Precomputed BLAST results at BLINK
Structure Features
PFAM predictions

Sequence data

Upstream 500 BP Region

AAAACGTCGTGAGACAGTTTGGTCCCTATCTGCCGTGGGCGTTGGAAGTTTGAAGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGACGAACCTCTGG TGTACCGGTTGTGACGCCAGTCGCATCGCCGGGTAGCTATGTTCGGAAGAGATAACCGCTGAAAGCATCTAAGCGGGAAACTCGCCTTAAGATGAGACTT CCCCGGGGACTTGATCCCCTTGAAGGGTCGTTCGAGACCAGGACGTTGATAGGTCGGGTGTGTAAGCGCAGTAATGCGTTCAGCTAACCGATACTAATTG CCCGTACGGCTTGATCCTATAACAAGTCTGTCTCGATATAGCCGTCGCGCTTCAGCGCCGACGCATATCGAGCCTCGAGTGCAAGCCACTCGATGTACAG CGGTTGACCTACCGCGTATGTGTGAGATACAACCTCACAACCCCAAATGACTGCTTCTTCCCAGATTGGTTGCGTTGCAAAGCCACGCAACAACCCTCTT

Need more than 500 BP? Try our sequence retrieval tool or view intergenic regions in GBrowse.

DNA Sequence

TGCCTGATGACCATAGCGAGTCGGTCCCACCCCTTCCCATCCCGAACAGGACCGTGAAACGACTCCACGCCGATGATAGTGCGGATTGCCCGTGTGAAAG TAGGTAATCGTCAGGC

Downstream 500 BP region

Click here to view the nucleotide sequence of the region 500 BP downstream of this gene.

Protein Sequence

References
PubMed