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               BCAL0007               
Key to diagram


View in GBrowse: (?) 19 putative orthologs Acknowledgements for this annotation
Gene Information
Strain Burkholderia cenocepacia J2315 (Tax ID: 216591) Replicon Chromosome_1(3602 genes, 3870082 bp) [ RefSeq ]
Gene name   Alternate Gene Names  
Locus tag BCAL0007 GenBank Identifier (GI) 206558410 (Precomputed BLAST results at BLINK )
Genomic location 8329 - 6845 (-) Feature type CDS 
Burkholderia Ortholog Group Explanation of Orthologous Groups
Product Information
Product Name two-component regulatory system, sensor kinase protein
Alternate Product Names
Subcellular localization
Alternate Annotations and Cross-References
RefSeq YP_002229170.1
GI 206558410
Entrez 6930678
GBrowse Click here for a GBrowse View of this and other annotations.
COG Predictions
COG PredictionExplanation of COG predictions
COG Accession Description Category
COG0642 BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]. Signal transduction mechanisms
TIGRFAM Prediction
TIGRFAM predictionExplanation of TIGRFAM predictions
Accession Name Function Significance Role Sub Role
TIGR01386 cztS_silS_copS heavy metal sensor kinase 2.5e-16 No Data No Data
Homology
BLINK Precomputed BLAST results at BLINK
Structure Features
PFAM predictions Explanation of PFAM predictions
Accession Domain Start Stop E-value Release No.
PF08521 2CSK_N, Two-component sensor kinase N-terminal. 22 164 2e-30 23.0
PF00512 HisKA, His Kinase A (phosphoacceptor) domain. 240 305 6e-09 23.0
PF02518 HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. 356 477 1e-24 23.0
 
Sequence data
Upstream 500 BP Region CGGCCGAGCTCGAAGCGCGCATCCGCGCGGTGATGCGCCGCAGCGGCCCGCACAGCGACATGCCGCGTCCGGAAGTGTCGCTCGGCGGCGTCCGCCTGTC GGGCGTCGACCGCCGCATCTTCAACGACGACAAGCCGCTCGAACTGTCGCCGCGCGAATTCGCGGTGCTCGAAATGCTGCTGCTGCGTCACGGCCGCGTC GTCAGCAAGGCGCAGTTGCAGGATCACCTCACGCACTTCGGCGGCGATCTCGGCGACACCGCGATCGAAGTCTACGTGCACCGCGTGCGCAAGAAACTCG AGCAGTGCCGGGTCGAAATCGTCACCGTGCGCGGCTTCGGCTACCTGCTGCAGGAAATCCGCCAGACGGCGAGCGTCTGAGCGACGCCGCGCGCCGGCCG GCCGCGTGCCGCGGCGCGCCTGTGTGCGGCTTGCGCGTCGCCGCCCGGCGCACGACCGCGCCGCTCCCCGTGAGCGGCGCTCATCCATTTGCCCGTCGAA

BLAST search against this genome or other genomes in database
Need more than 500 BP? Try our sequence retrieval tool or view intergenic regions in GBrowse.

DNA Sequence ATGTCTCCTGATCCGGCTGTGACCACCAGCCTGCGCCGCTCGCTGCTCCGGCGCCTCGCCGCCCCGCTGTCGATGCTCGCGCTGATGAGTGGCCTGATCG CCTACTGGCTCGCGTGGCAGTACACGCAGCACGTGATCGACCGCTCGCTCGCCGATCTCGCGACCGCCATCTCCAAACAGATCCAGATCGCCGGCCCCGA CGCGCCGTTCACGGTGCCGCCGCTCGCGCAGGCGATGTTCTCCGATCCGGCCGAAGCGCTGATCTACCGGATCAGCGACGGCGAACAGGAACTCGCCGGC GATCCGAAACTGCCGCTGCAGGGCATCAACGTGCGCCGCATGCACCATGCGTACGTGTTCGAGGCCGAGTACGACAATCGCGCGGTGCGGGTCGCGCAGG TGCGCGTCGACGACGTCGAGGGCGGCAAGCCGATGGTCGTCGAAGTCGCGCAGCCGGTGCGGCACCGCTACCGGATCGCGGCCGAATTCCTCGTCGCGAT CATGATGCCGCTGCTCCTGCTGCTGCTCGCGGGCTGGGGGATCGTGTGGCGCGTCGTGAACCAGCAGCTCGGCCCGCTCACGCATCTCGCGGATTCGCTG AACCGGCAGACCCACACGTCACTGGAGCCGGTCGACGAAACCGACGTGCCGCTGGAGATCCGGCCGCTGACGAGCGCGATGAACGCGCTGCTCGGCCGTC TGAAGACCGCGCTCGACGCGCAGCGCAAGTTCATCGCCGACGCCGCGCACCAGTTGCGCACGCCGCTCACCGCGGTGAAGCTGCATGCCGAGCAGGCGGC CGTCGCGCGCGACCCGCACCAGACCTTCGCCGCGGTACGCGAGCTGCGCGCGGCCGCCGACCGCGCGGTGCGGCTGTCCAATCAGCTGCTGTCGCTCGCG CGTGCCGAGCCGGGCGAACAGGCCGCGCGCTTCGTCGACGTCGACCTCGCGGCGATGGCGTTCGAGACGGGCGCCGAATGGGTGCCGCGCGCGCTCGCGT CGCATGTCGACCTCGGCTTCCAGCGCAGCGACGACCCGGGCGACGACGAGAAGCTGATCGTGCGCGGCAACCCGGTGCTGCTGCGCGAGGTGATCGCGAA CCTGCTCGACAATGCGCTGAAGTACGTGCCGCTCGCGCGGCCGGACGGCGCGCGGATCACGGTGAACGTCGCGCGTGCCGCGCTCGAGGGCAACCAGCCG GCCGCCGAGATCGTCGTCGAGGACAACGGCCCCGGCGTGCCCGCGAACCAGCAGGCCGACCTGTTCAAGCGCTTCTTCCGTGGCGACGCGCAGAGCGGCA ATGGCGTCGAGACGGGCGCCGGGCTCGGGCTCGCGATCGTGCACGACATCATCGCGATGCACGGCGGCACCGTGTCGTACGAGGATGCACCGGAAGGCGG CTCGCGCTTCGTGGTGCGGGTGCCGCTCGCCGCGCGTACGGAGAAGCCGGCCAGCGAAACGCCGGCCGCGGCGCCGACGCACTGA

BLAST search against this genome or other genomes in database


Downstream 500 BP region Click here to view the nucleotide sequence of the region 500 BP downstream of this gene.

Protein Sequence MSPDPAVTTSLRRSLLRRLAAPLSMLALMSGLIAYWLAWQYTQHVIDRSLADLATAISKQIQIAGPDAPFTVPPLAQAMFSDPAEALIYRISDGEQELAG DPKLPLQGINVRRMHHAYVFEAEYDNRAVRVAQVRVDDVEGGKPMVVEVAQPVRHRYRIAAEFLVAIMMPLLLLLLAGWGIVWRVVNQQLGPLTHLADSL NRQTHTSLEPVDETDVPLEIRPLTSAMNALLGRLKTALDAQRKFIADAAHQLRTPLTAVKLHAEQAAVARDPHQTFAAVRELRAAADRAVRLSNQLLSLA RAEPGEQAARFVDVDLAAMAFETGAEWVPRALASHVDLGFQRSDDPGDDEKLIVRGNPVLLREVIANLLDNALKYVPLARPDGARITVNVARAALEGNQP AAEIVVEDNGPGVPANQQADLFKRFFRGDAQSGNGVETGAGLGLAIVHDIIAMHGGTVSYEDAPEGGSRFVVRVPLAARTEKPASETPAAAPTH

BLAST search against this genome or other genomes in database
View precomputed BLAST results against all genomes at NCBI BLINK
References
PubMed  
We thank Cystic Fibrosis Foundation Therapeutics, Inc. for critical funding support for the Burkholderia Genome Database.



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Burkholderia Genome Database Version 1.0