Strain |
Burkholderia cenocepacia J2315
GCF_000009485.1|latest |
Locus Tag |
BCAM0918
|
NCBI Locus Tag | QU43_RS58960 |
Name |
sigE
|
Replicon | chromosome 2 |
Genomic location | 1009947 - 1011812 (+ strand) |
RefSeq | YP_002233536.1 |
GI | 206562773 |
Entrez | 6928653 |
GI | 206562773 |
INSDC | CAR54775.1 |
NCBI Locus Tag | QU43_RS58960 |
NCBI Old Locus Tag | BCAM0918 |
RefSeq | YP_002233536.1 |
UniParc | UPI00017B9ACC |
UniProtKB Acc | B4EN36 |
UniProtKB ID | B4EN36_BURCJ |
UniRef100 | UniRef100_B4EN36 |
UniRef50 | UniRef50_Q0K867 |
UniRef90 | UniRef90_Q9ZFR4 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
RNA polymerase sigma factor RpoD
|
Synonyms |
sigma factor 70 sigE |
Evidence for Translation | |
Charge (pH 7) | -35.83 |
Kyte-Doolittle Hydrophobicity Value | -0.532 |
Molecular Weight (kDa) | 70372.8 |
Isoelectric Point (pI) | 4.54 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera
|
Burkholderia Ortholog Group |
BG003025 (663 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BCAM0918
Search term: sigE
Search term: RNA polymerase sigma factor RpoD
|
Architecture of Burkholderia cepacia complex sigma70 gene family: evidence of alternative primary and clade-specific factors, and genomic instability.
Menard A, de Los Santos PE, Graindorge A, Cournoyer B
BMC Genomics 2007 Sep 4;8:308
PubMed ID: 17784948
|