Burkholderia cenocepacia J2315, BCAM0267 (opcI)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia cenocepacia J2315
Locus Tag
BCAM0267
NCBI Locus TagQU43_RS55740
Name
opcI
Replicon chromosome 2
Genomic location 320550 - 321584 (+ strand)

Cross-References

RefSeq WP_012493053.1
GI 206562134
Entrez 6928057
GI 206562134
INSDC CAR54125.1
NCBI Locus Tag QU43_RS55740
NCBI Old Locus Tag BCAM0267
RefSeq WP_012493053.1,GeneID
UniParc UPI00017B9A57
UniProtKB Acc B4EI78
UniProtKB ID B4EI78_BURCJ
UniRef100 UniRef100_A0A0D1DDF7
UniRef50 UniRef50_Q13HU7
UniRef90 UniRef90_B1K7W5

Product

Feature Type CDS
Coding Frame 1
Product Name
porin
Product Name Confidence: Class 1
Evidence for Translation
Charge (pH 7) 8.11
Kyte-Doolittle Hydrophobicity Value 0.147
Molecular Weight (kDa) 36083.4
Isoelectric Point (pI) 9.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 57 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG006317 (49 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAM0267
Search term: opcI
Search term: porin

References

The Burkholderia cepacia epidemic strain marker is part of a novel genomic island encoding both virulence and metabolism-associated genes in Burkholderia cenocepacia.
Baldwin A, Sokol PA, Parkhill J, Mahenthiralingam E.
Infect Immun. 2004 Mar;72(3):1537-47.
PubMed ID: 14977960