Burkholderia cenocepacia J2315, BCAL3527 (gspD)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL3527
NCBI Locus Tag	QU43_RS54370
Name	gspD
Replicon	chromosome 1
Genomic location	3862449 - 3864782 (- strand)

Cross-References

RefSeq	WP_012492992.1
GI	206561863
Entrez	6933677
GI	206561863
INSDC	CAR53850.1
NCBI Locus Tag	QU43_RS54370
NCBI Old Locus Tag	BCAL3527
RefSeq	WP_012492992.1,GeneID
UniParc	UPI00017B9A41
UniProtKB Acc	B4E7A1
UniProtKB ID	B4E7A1_BURCJ
UniRef100	UniRef100_B4E7A1
UniRef50	UniRef50_A1V993
UniRef90	UniRef90_B4E7A1

Product

Feature Type	CDS
Coding Frame	1
Product Name	type II secretion system protein D
Synonyms
Evidence for Translation
Charge (pH 7)	2.21
Kyte-Doolittle Hydrophobicity Value	-0.131
Molecular Weight (kDa)	80803.3
Isoelectric Point (pI)	8.56

Subcellular localization

Individual Mappings	Localization Confidence PMID Outer Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 343 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000049 (640 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL3527 Search term: gspD Search term: type II secretion system protein D

Human Homologs

References

Molecular characterization of genetic loci required for secretion of exoproducts in Burkholderia pseudomallei. DeShazer D, Brett PJ, Burtnick MN, Woods DE J Bacteriol 1999 Aug;181(15):4661-4 PubMed ID: 10419967