Strain |
Burkholderia cenocepacia J2315
GCF_000009485.1|latest |
Locus Tag |
BCAL2462
|
NCBI Locus Tag | QU43_RS48985 |
Name |
ecfE
|
Replicon | chromosome 1 |
Genomic location | 2727696 - 2728250 (- strand) |
RefSeq | WP_006497139.1 |
GI | 206560821 |
Entrez | 6932524 |
GI | 206560821 |
INSDC | CAR52763.1 |
NCBI Locus Tag | QU43_RS48985 |
NCBI Old Locus Tag | BCAL2462 |
RefSeq | WP_006497139.1,GeneID |
UniParc | UPI00017B992C |
UniProtKB Acc | B4E728 |
UniProtKB ID | B4E728_BURCJ |
UniRef100 | UniRef100_U1Z9N2 |
UniRef50 | UniRef50_D8J0K5 |
UniRef90 | UniRef90_V4ZU44 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
putative RNA polymerase sigma factor
|
Synonyms |
sigma factor 70 EcfE |
Evidence for Translation | |
Charge (pH 7) | -6.03 |
Kyte-Doolittle Hydrophobicity Value | -0.519 |
Molecular Weight (kDa) | 21262.8 |
Isoelectric Point (pI) | 4.99 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 394 genera
|
Burkholderia Ortholog Group |
BG006145 (148 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BCAL2462
Search term: ecfE
Search term: putative RNA polymerase sigma factor
|
Architecture of Burkholderia cepacia complex sigma70 gene family: evidence of alternative primary and clade-specific factors, and genomic instability.
Menard A, de Los Santos PE, Graindorge A, Cournoyer B
BMC Genomics 2007 Sep 4;8:308
PubMed ID: 17784948
|