Burkholderia mallei NCTC 10229, BMA10229_2091 (bopC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Burkholderia mallei NCTC 10229
GCF_000015605.1|latest |
| Locus Tag |
BMA10229_2091
|
| NCBI Locus Tag | BMA10229_RS09070 |
| Name |
bopC
|
| Replicon | chromosome II |
| Genomic location | 2141067 - 2142311 (+ strand) |
Cross-References
| RefSeq | YP_001025887.1 |
| GI | 124382483 |
| Entrez | 4790279 |
| GI | 124382483 |
| INSDC | ABM98546.2 |
| NCBI Locus Tag | BMA10229_RS09070 |
| NCBI Old Locus Tag | BMA10229_2091 |
| RefSeq | YP_001025887.1 |
| UniParc | UPI0000F05AE5 |
| UniProtKB Acc | A2S1R6 |
| UniProtKB Acc | A2S1R6 |
| UniProtKB ID | A2S1R6_BURM9 |
| UniProtKB ID | A2RW24_BURM9 |
| UniRef100 | UniRef100_A2S1R6 |
| UniRef50 | UniRef50_A2S1R6 |
| UniRef90 | UniRef90_A2S1R6 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
hypothetical protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -3.50 |
| Kyte-Doolittle Hydrophobicity Value | -0.338 |
| Molecular Weight (kDa) | 45581.5 |
| Isoelectric Point (pI) | 6.57 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
| Look for predicted 3D structure in AlphaFold DB: Search |
| Look for predicted 3D structure in AlphaFold DB: Search |
Virulence Evidence
| Source 1 | |
| Database | VFDB : VF0428 |
| Category | T3SS-3 |
| Evidence |
ECO:0000250
sequence similarity evidence used in manual assertion
|
| Host Organism | |
| Notes | |
| Annotation transferred from | Burkholderia pseudomallei K96243 |
| Reference | 17984080 |
Pathogen Association Analysis
| Results |
Pathogenic
Found only in pathogenic strains
Hits to this gene were found in 3 genera
|
Orthologs/Comparative Genomics
| Burkholderia Ortholog Group |
BG020942 (270 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: BMA10229_2091
Search term: bopC
|
Human Homologs
References
|
Unraveling type III secretion systems in the highly versatile Burkholderia pseudomallei.
Sun GW, Gan YH
Trends Microbiol 2010 Dec;18(12):561-8
PubMed ID: 20951592
|