Burkholderia glumae ATCC 33617, KS03_RS21965 (tepR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Burkholderia glumae LMG 2196 = ATCC 33617
GCF_000960995.1|latest
Locus Tag
KS03_RS21965
NCBI Old Locus TagKS03_1903
Name
tepR
Replicon chromosome I
Genomic location 2065859 - 2067259 (- strand)

Cross-References

RefSeq WP_012735038.1
GI 502216035
NCBI Locus Tag KS03_RS21965
NCBI Old Locus Tag KS03_1903
RefSeq WP_012735038.1

Product

Feature Type CDS
Coding Frame 1
Product Name
toxoflavin and eps regulator, TepR
Product Name Confidence: Class 2
Synonyms Fis family transcriptional regulator
Evidence for Translation
Charge (pH 7) -0.35
Kyte-Doolittle Hydrophobicity Value -0.131
Molecular Weight (kDa) 51074.8
Isoelectric Point (pI) 6.90

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000981 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: KS03_RS21965
Search term: tepR

Human Homologs

References

Identification of new regulatory genes involved in the pathogenic functions of the rice-pathogenic bacterium Burkholderia glumae.
Melanson RA, Barphagha I, Osti S, Lelis TP, Karki HS, Chen R, Shrestha BK, Ham JH
Microbiology 2017 Feb;163(2):266-279
PubMed ID: 28036242