Burkholderia thailandensis E264 ATCC 700388, BTH_II1228 (btaF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia thailandensis E264 ATCC 700388
GCF_000012365.1|latest
Locus Tag
BTH_II1228
NCBI Locus TagBTH_RS06290
Name
btaF
Replicon chromosome II
Genomic location 1450821 - 1451228 (- strand)
Transposon Mutants 2 transposon mutants in E264 ATCC 700388
CommentBelongs to the bactobolin biosynthetic gene cluster

Cross-References

RefSeq YP_439424.1
GI 83718077
Entrez 3844494
GI 83718077
NCBI Locus Tag BTH_RS06290
NCBI Old Locus Tag BTH_II1228
RefSeq WP_011401198.1
UniProtKB Acc Q2T5X5
UniProtKB ID Q2T5X5_BURTA

Product

Feature Type CDS
Coding Frame 1
Product Name
BtaF
Synonyms hypothetical protein
Evidence for Translation
Charge (pH 7) -5.83
Kyte-Doolittle Hydrophobicity Value 0.073
Molecular Weight (kDa) 14817.6
Isoelectric Point (pI) 4.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 2 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG017598 (335 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BTH_II1228
Search term: btaF
Search term: BtaF

Human Homologs

References

Quorum-sensing control of antibiotic synthesis in Burkholderia thailandensis.
Duerkop BA, Varga J, Chandler JR, Peterson SB, Herman JP, Churchill ME, Parsek MR, Nierman WC, Greenberg EP
J Bacteriol 2009 Jun;191(12):3909-18
PubMed ID: 19376863
Sources of diversity in bactobolin biosynthesis by Burkholderia thailandensis E264.
Carr G, Seyedsayamdost MR, Chandler JR, Greenberg EP, Clardy J
Org Lett 2011 Jun 17;13(12):3048-51
PubMed ID: 21615115
Quorum-sensing-regulated bactobolin production by Burkholderia thailandensis E264.
Seyedsayamdost MR, Chandler JR, Blodgett JA, Lima PS, Duerkop BA, Oinuma K, Greenberg EP, Clardy J
Org Lett 2010 Feb 19;12(4):716-9
PubMed ID: 20095633