Burkholderia pseudomallei K96243, BPSS1629 (bpscT2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
Locus Tag
BPSS1629
Name
bpscT2
Synonym: sctT
Replicon chromosome 2
Genomic location 2202787 - 2203818 (+ strand)
CommentThis gene is part of the type III secretion system T3SS-2 locus found in B. pseudomallei. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238).

Cross-References

RefSeq YP_111637.1
GI 53722652
Entrez 3096888
GI 53722652
INSDC CAH39104.1
NCBI Locus Tag BPSS1629
RefSeq YP_111637.1,GeneID
UniParc UPI000043BD80
UniProtKB Acc Q63JT5
UniProtKB ID Q63JT5_BURPS
UniRef100 UniRef100_Q63JT5
UniRef50 UniRef50_N0AEP3
UniRef90 UniRef90_C4AZL9

Product

Feature Type CDS
Coding Frame 1
Product Name
type III secretion system inner membrane export apparatus protein BpscT2 (T3SS-2)
Product Name Confidence: Class 2
Synonyms type III secretion protein
Evidence for Translation
Charge (pH 7) -2.59
Kyte-Doolittle Hydrophobicity Value 0.704
Molecular Weight (kDa) 34848.2
Isoelectric Point (pI) 5.17

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Flagellar
Note: This is based on PSORTb V3.0 secondary localization prediction
Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 136 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG017451 (457 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSS1629
Search term: bpscT2

References

PubMed ID: 15621426
PubMed ID: 28664152