Burkholderia pseudomallei K96243, BPSS1625 (bpspH2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
Locus Tag
BPSS1625
Name
bpspH2
Synonym: sctK
Replicon chromosome 2
Genomic location 2199563 - 2200240 (+ strand)
CommentThis gene is part of the type III secretion system T3SS-2 locus found in B. pseudomallei. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238).

Cross-References

RefSeq YP_111633.1
GI 53722648
Entrez 3095589
GI 53722648
INSDC CAH39100.1
NCBI Locus Tag BPSS1625
RefSeq YP_111633.1,GeneID
UniParc UPI000043BD7C
UniProtKB Acc Q63JT9
UniProtKB ID Q63JT9_BURPS
UniRef100 UniRef100_Q63JT9
UniRef50 UniRef50_Q2T7A6
UniRef90 UniRef90_Q63JT9

Product

Feature Type CDS
Coding Frame 1
Product Name
type III secretion system inner membrane component BpspH2 (T3SS-2)
Product Name Confidence: Class 2
Synonyms type III secretion protein
Evidence for Translation
Charge (pH 7) 5.35
Kyte-Doolittle Hydrophobicity Value -0.054
Molecular Weight (kDa) 24666.0
Isoelectric Point (pI) 9.64

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 2 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG019920 (435 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSS1625
Search term: bpspH2

References

PubMed ID: 15621426
PubMed ID: 28664152