Burkholderia pseudomallei K96243, BPSS1622 (bpspK2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
Locus Tag
BPSS1622
Name
bpspK2
Replicon chromosome 2
Genomic location 2197704 - 2198285 (+ strand)
CommentThis gene is part of the type III secretion system T3SS-2 locus found in B. pseudomallei. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238).

Cross-References

RefSeq YP_111630.1
GI 53722645
Entrez 3095189
GI 53722645
INSDC CAH39097.1
NCBI Locus Tag BPSS1622
RefSeq YP_111630.1,GeneID
UniParc UPI000043BD79
UniProtKB Acc Q63JU2
UniProtKB ID Q63JU2_BURPS
UniRef100 UniRef100_A0A097XQ70
UniRef50 UniRef50_A3MC48
UniRef90 UniRef90_A3MC48

Product

Feature Type CDS
Coding Frame 1
Product Name
type III secretion system inner rod component BpspK2 (T3SS-2)
Product Name Confidence: Class 2
Synonyms type III secretion protein
Evidence for Translation
Charge (pH 7) -9.08
Kyte-Doolittle Hydrophobicity Value 0.052
Molecular Weight (kDa) 20016.3
Isoelectric Point (pI) 4.44

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 4 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG019917 (430 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSS1622
Search term: bpspK2

References

PubMed ID: 15621426
PubMed ID: 28664152