Burkholderia pseudomallei K96243, BPSS1406 (BpspV)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
Locus Tag
BPSS1406
Name
BpspV
Replicon chromosome 2
Genomic location 1919731 - 1920690 (+ strand)
CommentThis gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238).

Cross-References

RefSeq YP_111418.1
GI 53722433
Entrez 3095527
GI 53722433
NCBI Locus Tag BPSS1406
RefSeq YP_111418.1,GeneID
UniProtKB Acc Q63KF4
UniProtKB ID Q63KF4_BURPS

Product

Feature Type CDS
Coding Frame 1
Product Name
type III secretion system secreted regulator BpspV (T3SS-1)
Product Name Confidence: Class 2
Synonyms hypothetical protein
Evidence for Translation
Charge (pH 7) 4.85
Kyte-Doolittle Hydrophobicity Value -0.664
Molecular Weight (kDa) 34645.3
Isoelectric Point (pI) 9.00

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Pathogenic
Found only in pathogenic strains
Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG020889 (285 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSS1406
Search term: BpspV

References

PubMed ID: 20109238
PubMed ID: 28664152
PubMed ID: 21768285
PubMed ID: 10403415
PubMed ID: 11990489
PubMed ID: 15621426