Burkholderia pseudomallei K96243, BPSL3207 (rpsC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL3207
Name
rpsC
Replicon chromosome 1
Genomic location 3804935 - 3805735 (- strand)

Cross-References

RefSeq YP_109801.1
GI 53720815
Entrez 3091835
GI 53720815
INSDC CAH37218.1
NCBI Locus Tag BPSL3207
RefSeq YP_109801.1,GeneID
UniParc UPI000043B67C
UniProtKB Acc Q63Q17
UniProtKB ID RS3_BURPS
UniRef100 UniRef100_A3MRW0
UniRef50 UniRef50_Q13TH6
UniRef90 UniRef90_Q13TH6

Product

Feature Type CDS
Coding Frame 1
Product Name
30S ribosomal protein S3
Synonyms
Evidence for Translation
Charge (pH 7) 21.72
Kyte-Doolittle Hydrophobicity Value -0.746
Molecular Weight (kDa) 29919.1
Isoelectric Point (pI) 11.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Extracellular Class 1
quantitative mass spectrometry evidence
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 665 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000263 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL3207
Search term: rpsC

Human Homologs

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268