Burkholderia pseudomallei K96243, BPSL1458 (rpsF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL1458
Name
rpsF
Replicon chromosome 1
Genomic location 1694743 - 1695117 (+ strand)

Cross-References

RefSeq YP_108080.1
GI 53719094
Entrez 3093548
GI 53719094
INSDC CAH35460.1
NCBI Locus Tag BPSL1458
RefSeq YP_108080.1,GeneID
UniParc UPI000043AFF6
UniProtKB Acc Q63UY6
UniProtKB ID RS6_BURPS
UniRef100 UniRef100_A3MKD6
UniRef50 UniRef50_P02358
UniRef90 UniRef90_B2JG18

Product

Feature Type CDS
Coding Frame 1
Product Name
30S ribosomal protein S6
Synonyms
Evidence for Translation
Charge (pH 7) 0.61
Kyte-Doolittle Hydrophobicity Value -0.562
Molecular Weight (kDa) 14306.4
Isoelectric Point (pI) 7.21

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Extracellular Class 1
quantitative mass spectrometry evidence
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 567 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG001707 (652 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL1458
Search term: rpsF

Human Homologs

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268