Burkholderia cenocepacia K56-2Valvano, BURCENK562V_RS18925 (opcI)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Burkholderia cenocepacia K56-2Valvano
Locus Tag
BURCENK562V_RS18925
Name
opcI
Replicon ctg7180000002940B
Genomic location 2951218 - 2952252 (+ strand)

Cross-References

RefSeq WP_012493053.1
GI 501469608
GI 501469608
NCBI Locus Tag BURCENK562V_RS18925
RefSeq WP_012493053.1

Product

Feature Type CDS
Coding Frame 1
Product Name
porin
Product Name Confidence: Class 1
Evidence for Translation
Charge (pH 7) 8.11
Kyte-Doolittle Hydrophobicity Value 0.147
Molecular Weight (kDa) 36083.4
Isoelectric Point (pI) 9.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG006317 (49 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: opcI
Search term: porin

References

The Burkholderia cepacia epidemic strain marker is part of a novel genomic island encoding both virulence and metabolism-associated genes in Burkholderia cenocepacia.
Baldwin A, Sokol PA, Parkhill J, Mahenthiralingam E.
Infect Immun. 2004 Mar;72(3):1537-47.
PubMed ID: 14977960