Burkholderia cenocepacia J2315, BCAM1111 (speF)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAM1111
NCBI Locus Tag	QU43_RS59910
Name	speF
Replicon	chromosome 2
Genomic location	1201382 - 1203562 (- strand)

Cross-References

RefSeq	WP_006488848.1
GI	206562965
Entrez	6928813
GI	206562965
INSDC	CAR54968.1
NCBI Locus Tag	QU43_RS59910
NCBI Old Locus Tag	BCAM1111
RefSeq	WP_006488848.1,GeneID
UniParc	UPI00017B9CE3
UniProtKB Acc	B4EG91
UniProtKB ID	B4EG91_BURCJ
UniRef100	UniRef100_B4EG91
UniRef50	UniRef50_P43099
UniRef90	UniRef90_B4EG91

Product

Feature Type	CDS
Coding Frame	1
Product Name	ornithine decarboxylase
Synonyms
Evidence for Translation
Charge (pH 7)	-7.82
Kyte-Doolittle Hydrophobicity Value	-0.180
Molecular Weight (kDa)	81270.9
Isoelectric Point (pI)	6.48

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 233 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG006506 (75 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAM1111 Search term: speF Search term: ornithine decarboxylase

Human Homologs

References