Burkholderia cenocepacia J2315, BCAL3414

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL3414
NCBI Locus TagQU43_RS53770
Name
Replicon chromosome 1
Genomic location 3739669 - 3741753 (- strand)

Cross-References

RefSeq WP_006489403.1
GI 206561751
Entrez 6933314
GI 206561751
INSDC CAR53737.1
NCBI Locus Tag QU43_RS53770
NCBI Old Locus Tag BCAL3414
RefSeq WP_006489403.1,GeneID
UniParc UPI00017B9702
UniProtKB Acc B4E5U4
UniProtKB ID B4E5U4_BURCJ
UniRef100 UniRef100_A0A095EU89
UniRef50 UniRef50_A9I1V4
UniRef90 UniRef90_A9AI33

Product

Feature Type CDS
Coding Frame 1
Product Name
putative exoribonuclease II
Synonyms
Evidence for Translation
Charge (pH 7) -31.69
Kyte-Doolittle Hydrophobicity Value -0.247
Molecular Weight (kDa) 75868.6
Isoelectric Point (pI) 4.62

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 250 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000498 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL3414

Human Homologs

Ensembl 97, assembly GRCh38.p12
helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
E-value: 9.3e-05
Percent Identity: 38.0
Ensembl 97, assembly GRCh38.p12
helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
E-value: 9.3e-05
Percent Identity: 38.0

References

No references are associated with this feature.