Burkholderia cenocepacia J2315, BCAL2103 (dapE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL2103
NCBI Locus TagQU43_RS47075
Name
dapE
Replicon chromosome 1
Genomic location 2316957 - 2318096 (+ strand)

Cross-References

RefSeq WP_006493370.1
GI 206560465
Entrez 6932251
GI 206560465
INSDC CAR52403.1
NCBI Locus Tag QU43_RS47075
NCBI Old Locus Tag BCAL2103
RefSeq WP_006493370.1,GeneID
UniParc UPI00017B935A
UniProtKB Acc B4ECP3
UniProtKB ID DAPE_BURCJ
UniRef100 UniRef100_B4ECP3
UniRef50 UniRef50_Q9KQ52
UniRef90 UniRef90_Q2SX11

Product

Feature Type CDS
Coding Frame 1
Product Name
succinyl-diaminopimelate desuccinylase
Synonyms
Evidence for Translation
Charge (pH 7) -9.26
Kyte-Doolittle Hydrophobicity Value -0.116
Molecular Weight (kDa) 40856.9
Isoelectric Point (pI) 5.95

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 528 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG001921 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL2103
Search term: dapE

Human Homologs

References

No references are associated with this feature.