Burkholderia cenocepacia J2315, BCAL1995 (clpX)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL1995
NCBI Locus TagQU43_RS46525
Name
clpX
Replicon chromosome 1
Genomic location 2201604 - 2202875 (- strand)

Cross-References

RefSeq WP_006489345.1
GI 206560358
Entrez 6933795
GI 206560358
INSDC CAR52295.1
NCBI Locus Tag QU43_RS46525
NCBI Old Locus Tag BCAL1995
RefSeq WP_006489345.1,GeneID
UniParc UPI0000334975
UniProtKB Acc B4EBM2
UniProtKB ID CLPX_BURCJ
UniRef100 UniRef100_Q1BH84
UniRef50 UniRef50_Q8UFY5
UniRef90 UniRef90_Q1BH84

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent protease ATP-binding subunit ClpX
Synonyms
Evidence for Translation
Charge (pH 7) -3.99
Kyte-Doolittle Hydrophobicity Value -0.187
Molecular Weight (kDa) 46404.1
Isoelectric Point (pI) 5.84

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 616 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG001786 (653 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL1995
Search term: clpX

Human Homologs

Ensembl 97, assembly GRCh38.p12
caseinolytic mitochondrial matrix peptidase chaperone subunit [Source:HGNC Symbol;Acc:HGNC:2088]
E-value: 3.0e-86
Percent Identity: 43.6

References

No references are associated with this feature.