Burkholderia cenocepacia J2315, BCAL1945 (rpsF)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL1945
NCBI Locus Tag	QU43_RS46270
Name	rpsF
Replicon	chromosome 1
Genomic location	2144327 - 2144701 (- strand)

Cross-References

RefSeq	WP_006486255.1
GI	206560309
Entrez	6932131
GI	206560309
INSDC	CAR52246.1
NCBI Locus Tag	QU43_RS46270
NCBI Old Locus Tag	BCAL1945
RefSeq	WP_006486255.1,GeneID
UniParc	UPI0000E96528
UniProtKB Acc	B4EBH3
UniProtKB ID	RS6_BURCJ
UniRef100	UniRef100_B1JTF3
UniRef50	UniRef50_P02358
UniRef90	UniRef90_B2JG18

Product

Feature Type	CDS
Coding Frame	1
Product Name	30S ribosomal protein S6
Synonyms
Evidence for Translation
Charge (pH 7)	0.61
Kyte-Doolittle Hydrophobicity Value	-0.542
Molecular Weight (kDa)	14276.4
Isoelectric Point (pI)	7.21

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 568 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG001707 (652 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL1945 Search term: rpsF Search term: 30S ribosomal protein S6

Human Homologs

References