Burkholderia cenocepacia J2315, BCAL0933 (rhlE1)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL0933
NCBI Locus Tag	QU43_RS41215
Name	rhlE1
Replicon	chromosome 1
Genomic location	1015888 - 1017321 (- strand)

Cross-References

RefSeq	WP_006497357.1
GI	206559326
Entrez	6931329
GI	206559326
INSDC	CAR51239.1
NCBI Locus Tag	QU43_RS41215
NCBI Old Locus Tag	BCAL0933
RefSeq	WP_006497357.1,GeneID
UniParc	UPI00017B9073
UniProtKB Acc	B4EBW3
UniProtKB ID	B4EBW3_BURCJ
UniRef100	UniRef100_B4EBW3
UniRef50	UniRef50_Q5P3B3
UniRef90	UniRef90_B4EBW3

Product

Feature Type	CDS
Coding Frame	1
Product Name	putative ATP-dependent RNA helicase 1
Synonyms
Evidence for Translation
Charge (pH 7)	18.35
Kyte-Doolittle Hydrophobicity Value	-0.434
Molecular Weight (kDa)	51386.9
Isoelectric Point (pI)	10.61

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 640 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG002529 (654 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL0933 Search term: rhlE1 Search term: putative ATP-dependent RNA helicase 1

Human Homologs

Ensembl 97, assembly GRCh38.p12	ENSP00000353284 DEAD-box helicase 3 Y-linked [Source:HGNC Symbol;Acc:HGNC:2699] E-value: 3.9e-71 Percent Identity: 41.5
Ensembl 97, assembly GRCh38.p12	ENSP00000336725 DEAD-box helicase 3 Y-linked [Source:HGNC Symbol;Acc:HGNC:2699] E-value: 3.9e-71 Percent Identity: 41.5

References