Strain |
Burkholderia cenocepacia J2315
GCF_000009485.1|latest |
Locus Tag |
BCAL0348
|
NCBI Locus Tag | QU43_RS38275 |
Name |
tssA
Synonym: bcsE |
Replicon | chromosome 1 |
Genomic location | 375780 - 376901 (+ strand) |
Comment | Part of the T6SS gene cluster |
RefSeq | WP_006484398.1 |
GI | 206558754 |
Entrez | 6933437 |
GI | 206558754 |
INSDC | CAR50658.1 |
NCBI Locus Tag | QU43_RS38275 |
NCBI Old Locus Tag | BCAL0348 |
RefSeq | WP_006484398.1,GeneID |
UniParc | UPI00017B9103 |
UniProtKB Acc | B4E6S0 |
UniProtKB ID | B4E6S0_BURCJ |
UniRef100 | UniRef100_A0A0D1D911 |
UniRef50 | UniRef50_A1UZK2 |
UniRef90 | UniRef90_B1JUP4 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
type VI secretion system protein TssA
|
Synonyms |
putative type VI secretion system protein TssA |
Evidence for Translation | |
Charge (pH 7) | -25.59 |
Kyte-Doolittle Hydrophobicity Value | -0.458 |
Molecular Weight (kDa) | 41807.0 |
Isoelectric Point (pI) | 4.42 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
6H8E | TRANSPORT PROTEIN | 08/02/18 | Truncated derivative of the C-terminal domain of the TssA component of the type VI secretion system from Burkholderia cenocepacia | BURKHOLDERIA CENOCEPACIA H111 | 2.35 | X-RAY DIFFRACTION | 100.0 |
6HS6 | TRANSPORT PROTEIN | 09/28/18 | C-terminal domain of the TssA component of the type VI secretion system from Burkholderia cenocepacia | BURKHOLDERIA CENOCEPACIA H111 | 3.08 | X-RAY DIFFRACTION | 100.0 |
6H8F | TRANSPORT PROTEIN | 08/02/18 | Fragment of the C-terminal domain of the TssA component of the type VI secretion system from Burkholderia cenocepacia | BURKHOLDERIA CENOCEPACIA H111 | 1.78 | X-RAY DIFFRACTION | 100.0 |
6HS5 | TRANSPORT PROTEIN | 09/28/18 | N-terminal domain including the conserved ImpA_N region of the TssA component of the type VI secretion system from Burkholderia cenocepacia | BURKHOLDERIA CENOCEPACIA H111 | 1.8 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 77 genera
|
Burkholderia Ortholog Group |
BG000373 (645 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BCAL0348
Search term: tssA
Search term: type VI secretion system protein TssA
|
A novel sensor kinase-response regulator hybrid controls biofilm formation and type VI secretion system activity in Burkholderia cenocepacia.
Aubert DF, Flannagan RS, Valvano MA
Infect Immun 2008 May;76(5):1979-91
PubMed ID: 18316384
|
Quantification of type VI secretion system activity in macrophages infected with Burkholderia cenocepacia.
Aubert DF, Hu S, Valvano MA
Microbiology 2015 Nov;161(11):2161-73
PubMed ID: 26364149
|