Burkholderia cenocepacia J2315, BCAL0292

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL0292
NCBI Locus Tag	QU43_RS37990
Name
Replicon	chromosome 1
Genomic location	325889 - 326455 (+ strand)

Cross-References

RefSeq	WP_012492302.1
GI	206558698
Entrez	6930857
GI	206558698
INSDC	CAR50602.1
NCBI Locus Tag	QU43_RS37990
NCBI Old Locus Tag	BCAL0292
RefSeq	WP_012492302.1,GeneID
UniParc	UPI00017B9078
UniProtKB Acc	B4E615
UniProtKB ID	B4E615_BURCJ
UniRef100	UniRef100_B4E615
UniRef50	UniRef50_A9ADQ2
UniRef90	UniRef90_B4E615

Product

Feature Type	CDS
Coding Frame	1
Product Name	2',5' RNA ligase family protein
Synonyms
Evidence for Translation
Charge (pH 7)	4.06
Kyte-Doolittle Hydrophobicity Value	0.171
Molecular Weight (kDa)	19920.9
Isoelectric Point (pI)	8.56

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 87 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000316 (622 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL0292 Search term: 2',5' RNA ligase family protein

Human Homologs

References