Burkholderia cenocepacia J2315, BCAL0246 (rplE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL0246
NCBI Locus TagQU43_RS37765
Name
rplE
Replicon chromosome 1
Genomic location 280988 - 281527 (+ strand)

Cross-References

RefSeq WP_006482882.1
GI 206558653
Entrez 6934080
GI 206558653
INSDC CAR50557.1
NCBI Locus Tag QU43_RS37765
NCBI Old Locus Tag BCAL0246
RefSeq WP_006482882.1,GeneID
UniParc UPI0000599ADE
UniProtKB Acc B4E5D2
UniProtKB ID RL5_BURCJ
UniRef100 UniRef100_B1YRP1
UniRef50 UniRef50_P08895
UniRef90 UniRef90_A3MRW6

Product

Feature Type CDS
Coding Frame 1
Product Name
50S ribosomal protein L5
Synonyms
Evidence for Translation
Charge (pH 7) 10.99
Kyte-Doolittle Hydrophobicity Value -0.130
Molecular Weight (kDa) 20041.3
Isoelectric Point (pI) 10.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 665 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000269 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL0246
Search term: rplE

Human Homologs

References

No references are associated with this feature.