Burkholderia cenocepacia J2315, BCAL0233 (rpsJ)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL0233
NCBI Locus Tag	QU43_RS37700
Name	rpsJ
Replicon	chromosome 1
Genomic location	274742 - 275053 (+ strand)

Cross-References

RefSeq	WP_004199280.1
GI	206558640
Entrez	6934208
GI	206558640
INSDC	CAR50544.1
NCBI Locus Tag	QU43_RS37700
NCBI Old Locus Tag	BCAL0233
RefSeq	WP_004199280.1,GeneID
UniParc	UPI00003A669B
UniProtKB Acc	B4E5B9
UniProtKB ID	RS10_BURCJ
UniRef100	UniRef100_B1YRC9
UniRef50	UniRef50_Q9Z803
UniRef90	UniRef90_A1VIP9

Product

Feature Type	CDS
Coding Frame	1
Product Name	30S ribosomal protein S10
Synonyms
Evidence for Translation
Charge (pH 7)	4.47
Kyte-Doolittle Hydrophobicity Value	-0.414
Molecular Weight (kDa)	11827.7
Isoelectric Point (pI)	10.46

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 664 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000256 (655 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL0233 Search term: rpsJ Search term: 30S ribosomal protein S10

Human Homologs

References