Burkholderia cenocepacia J2315, BCAL0087

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL0087
NCBI Locus TagQU43_RS36935
Name
Replicon chromosome 1
Genomic location 107182 - 108714 (+ strand)

Cross-References

RefSeq WP_012492258.1
GI 206558493
Entrez 6930737
GI 206558493
NCBI Locus Tag QU43_RS36935
NCBI Old Locus Tag BCAL0087
RefSeq WP_012492258.1,GeneID
UniProtKB Acc B4EF50
UniProtKB ID B4EF50_BURCJ

Product

Feature Type CDS
Coding Frame 1
Product Name
putative reverse transcriptase-group II intron
Synonyms
Evidence for Translation
Charge (pH 7) 40.31
Kyte-Doolittle Hydrophobicity Value -0.601
Molecular Weight (kDa) 59030.0
Isoelectric Point (pI) 11.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 251 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG005224 (380 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL0087

Human Homologs

References

No references are associated with this feature.