Burkholderia cenocepacia J2315, BCAM1946

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00702
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00702
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00702
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00915
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015562 efflux transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00915
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0042908 xenobiotic transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00915
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.2090.10 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 728 816 0.0
SUPERFAMILY SSF82693 41 134 1.74E-26
Gene3D G3DSA:3.30.70.1440 676 874 0.0
TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 3 1038 0.0
Gene3D G3DSA:3.30.70.1430 40 824 0.0
SUPERFAMILY SSF82693 575 678 1.62E-21
SUPERFAMILY SSF82866 813 1036 5.23E-44
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 472 495 1.4E-88
Gene3D G3DSA:1.20.1640.10 523 1031 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 339 362 1.4E-88
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 562 579 1.4E-88
Coils Coil 1052 1057 -
SUPERFAMILY SSF82866 299 499 9.68E-53
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 394 418 1.4E-88
SUPERFAMILY SSF82693 139 333 1.46E-24
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 38 56 1.4E-88
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 447 470 1.4E-88
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 366 387 1.4E-88
Coils Coil 721 741 -
Gene3D G3DSA:1.20.1640.10 10 522 0.0
SUPERFAMILY SSF82714 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 729 813 4.45E-19
SUPERFAMILY SSF82714 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 185 275 2.88E-21
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 631 645 1.4E-88
Pfam PF00873 AcrB/AcrD/AcrF family IPR001036 Acriflavin resistance protein 3 1034 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 10 34 1.4E-88
Gene3D G3DSA:3.30.2090.10 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 181 278 0.0
Gene3D G3DSA:3.30.70.1320 135 335 0.0
Gene3D G3DSA:3.30.70.1430 577 675 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.