Burkholderia cenocepacia J2315, BCAL1933 (arnA1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:1901760 beta-L-Ara4N-lipid A biosynthetic process
IGC
Inferred from Genomic Context 		ECO:0000317
genomic context evidence used in manual assertion		 22742453 Reviewed by curator
Biological Process GO:0009245 lipid A biosynthetic process
IGC
Inferred from Genomic Context 		ECO:0000044
sequence similarity evidence		 17337576 Reviewed by curator
Molecular Function GO:0016742 hydroxymethyl-, formyl- and related transferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53328
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53328
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50486
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj00670 One carbon pool by folate 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj00970 Aminoacyl-tRNA biosynthesis 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00670 One carbon pool by folate InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00970 Aminoacyl-tRNA biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF53328 IPR036477 Formyl transferase, N-terminal domain superfamily 5 204 1.24E-54
Pfam PF00551 Formyl transferase IPR002376 Formyl transferase, N-terminal 25 179 1.9E-27
SUPERFAMILY SSF50486 IPR011034 Formyl transferase-like, C-terminal domain superfamily 204 292 2.04E-18
Gene3D G3DSA:3.40.50.12230 4 311 2.2E-90
Pfam PF02911 Formyl transferase, C-terminal domain IPR005793 Formyl transferase, C-terminal 204 292 1.3E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.