Burkholderia cenocepacia J2315, BCAL0115 (rpsU)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00030
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00030
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00030
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03010 Ribosome 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00976 Ribosomal protein S21 family signature IPR001911 Ribosomal protein S21 5 13 3.4E-13
TIGRFAM TIGR00030 S21p: ribosomal protein bS21 IPR001911 Ribosomal protein S21 2 59 1.1E-21
Pfam PF01165 Ribosomal protein S21 IPR001911 Ribosomal protein S21 4 56 1.6E-18
PRINTS PR00976 Ribosomal protein S21 family signature IPR001911 Ribosomal protein S21 25 35 3.4E-13
PRINTS PR00976 Ribosomal protein S21 family signature IPR001911 Ribosomal protein S21 37 47 3.4E-13
Hamap MF_00358 30S ribosomal protein S21 [rpsU]. IPR001911 Ribosomal protein S21 1 57 20.2
Gene3D G3DSA:1.20.5.1150 IPR038380 Ribosomal protein S21 superfamily 16 54 1.7E-17
PRINTS PR00976 Ribosomal protein S21 family signature IPR001911 Ribosomal protein S21 13 22 3.4E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.