Burkholderia cenocepacia J2315, BCAL0075 (gcvT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006546 glycine catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00259
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004047 aminomethyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00259
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.1360.120
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG (InterPro) 00260 Glycine, serine and threonine metabolism InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bcj00260 Glycine, serine and threonine metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00670 One carbon pool by folate InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bcj01200 Carbon metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj00670 One carbon pool by folate 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01571 Aminomethyltransferase folate-binding domain IPR006222 Aminomethyltransferase, folate-binding domain 9 262 1.3E-84
Gene3D G3DSA:3.30.70.1400 53 142 5.5E-78
SUPERFAMILY SSF101790 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal 278 368 7.19E-21
TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein IPR006223 Glycine cleavage system T protein 5 366 1.0E-116
Gene3D G3DSA:3.30.1360.120 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 8 239 5.5E-78
Gene3D G3DSA:2.40.30.110 283 372 4.2E-26
Hamap MF_00259 Aminomethyltransferase [gcvT]. IPR022903 Glycine cleavage system T protein, bacteria 3 366 42.843
PIRSF PIRSF006487 IPR028896 Aminomethyltransferase-like 1 371 1.4E-79
Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain IPR013977 Glycine cleavage T-protein, C-terminal barrel domain 287 364 1.1E-13
SUPERFAMILY SSF103025 4 279 2.51E-86
Gene3D G3DSA:4.10.1250.10 240 282 3.1E-20

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.