Burkholderia cenocepacia J2315, BCAL0024 (gidA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0002098 tRNA wobble uridine modification
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00129
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.10.1800 460 560 4.0E-27
Gene3D G3DSA:3.50.50.60 IPR036188 FAD/NAD(P)-binding domain superfamily 296 459 1.9E-57
Gene3D G3DSA:3.50.50.60 IPR036188 FAD/NAD(P)-binding domain superfamily 2 222 1.3E-87
ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. IPR020595 MnmG-related, conserved site 369 392 -
Gene3D G3DSA:1.10.150.570 579 632 1.8E-24
SUPERFAMILY SSF51905 IPR036188 FAD/NAD(P)-binding domain superfamily 6 262 2.75E-48
TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 7 631 5.6E-275
SMART SM01228 556 627 2.4E-42
ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. IPR020595 MnmG-related, conserved site 274 288 -
Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 5 634 42.82
Pfam PF01134 Glucose inhibited division protein A 8 400 4.5E-166
MobiDBLite mobidb-lite consensus disorder prediction 637 656 -
Pfam PF13932 GidA associated domain IPR026904 GidA associated domain 3 403 626 1.6E-75

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.