Burkholderia pseudomallei K96243, BPSS1629 (bpscT2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0030254 protein secretion by the type III secretion system
TAS
Traceable Author Statement
ECO:0000304
traceable author statement used in manual assertion
28664152 Reviewed by curator
Biological Process GO:0006605 protein targeting
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01311
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01311
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01401
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bps03070 Bacterial secretion system 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT IPR006304 Type III secretion protein SpaR/YscT 15 255 2.8E-55
Pfam PF01311 Bacterial export proteins, family 1 IPR002010 Type III secretion system inner membrane R protein 22 253 1.2E-42
Pfam PF01391 Collagen triple helix repeat (20 copies) IPR008160 Collagen triple helix repeat 272 327 1.3E-7
PRINTS PR00953 Type III secretion system inner membrane R protein family signature IPR002010 Type III secretion system inner membrane R protein 87 106 1.4E-21
PRINTS PR00953 Type III secretion system inner membrane R protein family signature IPR002010 Type III secretion system inner membrane R protein 211 230 1.4E-21
MobiDBLite mobidb-lite consensus disorder prediction 308 343 -
PRINTS PR00953 Type III secretion system inner membrane R protein family signature IPR002010 Type III secretion system inner membrane R protein 29 50 1.4E-21
PRINTS PR00953 Type III secretion system inner membrane R protein family signature IPR002010 Type III secretion system inner membrane R protein 189 211 1.4E-21

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.