Burkholderia pseudomallei K96243, BPSS1498 (tssD-5)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0033103 | protein secretion by the type VI secretion system | Traceable Author Statement | ECO:0000304 traceable author statement used in manual assertion |
17660433 | Reviewed by curator |
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | bps03070 | Bacterial secretion system | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF05638 | Type VI secretion system effector, Hcp | IPR008514 | Type VI secretion system effector, Hcp | 6 | 155 | 2.3E-21 |
| SUPERFAMILY | SSF141452 | IPR036624 | Hcp1-like superfamily | 4 | 168 | 2.88E-26 | |
| Gene3D | G3DSA:2.30.110.20 | IPR036624 | Hcp1-like superfamily | 3 | 169 | 6.3E-39 | |
| TIGRFAM | TIGR03344 | VI_effect_Hcp1: type VI secretion system effector, Hcp1 family | IPR008514 | Type VI secretion system effector, Hcp | 1 | 168 | 1.2E-48 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.