Burkholderia pseudomallei K96243, BPSS1404 (bpscR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0030254 protein secretion by the type III secretion system
TAS
Traceable Author Statement 		ECO:0000304
traceable author statement used in manual assertion		 28664152 Reviewed by curator
Biological Process GO:0015031 protein transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01102
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00813
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015031 protein transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01102
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00813
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01102
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01102
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00813
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00813
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bps03070 Bacterial secretion system 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01302 Type III secretion system inner membrane P protein family signature IPR005838 Type III secretion system inner membrane P protein 165 186 1.4E-63
Pfam PF00813 FliP family IPR005838 Type III secretion system inner membrane P protein 14 211 1.8E-61
PRINTS PR01302 Type III secretion system inner membrane P protein family signature IPR005838 Type III secretion system inner membrane P protein 30 50 1.4E-63
TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family IPR005773 Yop virulence translocation protein R 10 211 4.1E-83
PRINTS PR01302 Type III secretion system inner membrane P protein family signature IPR005838 Type III secretion system inner membrane P protein 144 164 1.4E-63
PRINTS PR01302 Type III secretion system inner membrane P protein family signature IPR005838 Type III secretion system inner membrane P protein 11 30 1.4E-63
ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. IPR005838 Type III secretion system inner membrane P protein 192 204 -
PRINTS PR01302 Type III secretion system inner membrane P protein family signature IPR005838 Type III secretion system inner membrane P protein 50 69 1.4E-63
ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. IPR005838 Type III secretion system inner membrane P protein 144 159 -
PRINTS PR01302 Type III secretion system inner membrane P protein family signature IPR005838 Type III secretion system inner membrane P protein 189 214 1.4E-63

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.