Burkholderia cenocepacia AU 1054, BCEN_RS14475

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00345
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.640.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0030170 pyridoxal phosphate binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00155
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00155
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00345
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction 472 497 -
Pfam PF00155 Aminotransferase class I and II IPR004839 Aminotransferase, class I/classII 145 393 5.4E-17
CDD cd00609 AAT_like 116 466 2.78199E-51
Gene3D G3DSA:3.40.640.10 IPR015421 Pyridoxal phosphate-dependent transferase, major domain 111 463 2.0E-94
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 20 88 3.91E-18
PRINTS PR00035 GntR bacterial regulatory protein HTH signature IPR000524 Transcription regulator HTH, GntR 45 59 8.2E-6
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 19 110 7.4E-19
CDD cd07377 WHTH_GntR IPR000524 Transcription regulator HTH, GntR 21 86 3.40068E-18
MobiDBLite mobidb-lite consensus disorder prediction 480 497 -
PRINTS PR00035 GntR bacterial regulatory protein HTH signature IPR000524 Transcription regulator HTH, GntR 59 75 8.2E-6
ProSiteProfiles PS50949 GntR-type HTH domain profile. IPR000524 Transcription regulator HTH, GntR 20 88 20.889
SMART SM00345 IPR000524 Transcription regulator HTH, GntR 26 85 5.8E-15
SUPERFAMILY SSF53383 IPR015424 Pyridoxal phosphate-dependent transferase 115 469 4.9E-70
Pfam PF00392 Bacterial regulatory proteins, gntR family IPR000524 Transcription regulator HTH, GntR 24 85 1.3E-16

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.