BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0001[271848] (395 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0002[271848] (347 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0003[271848] (126 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0004[271848] (202 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0005[271848] (399 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ENSP00000248924 pep:known-ccds chromosome:NCBI36:22:36533891:365... 432 e-121 ENSP00000364116 pep:known-ccds chromosome:NCBI36:X:55052213:5507... 234 1e-61 ENSP00000337131 pep:known-ccds chromosome:NCBI36:X:55052213:5507... 234 1e-61 ENSP00000332369 pep:known-ccds chromosome:NCBI36:X:55052213:5507... 234 1e-61 ENSP00000309259 pep:known-ccds chromosome:NCBI36:3:52207156:5222... 206 3e-53 ENSP00000371110 pep:known chromosome:NCBI36:22:36533891:36543129... 192 7e-49 ENSP00000367436 pep:known chromosome:NCBI36:20:12937642:13093118... 182 8e-46 ENSP00000216484 pep:known-ccds chromosome:NCBI36:14:77043025:771... 176 3e-44 ENSP00000262554 pep:known-ccds chromosome:NCBI36:9:93833248:9391... 125 1e-28 >ENSP00000248924 pep:known-ccds chromosome:NCBI36:22:36533891:36543129:1 gene:ENSG00000100116 transcript:ENST00000248924 CCDS13957.1 Length = 419 Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust. Identities = 219/392 (55%), Positives = 277/392 (70%), Gaps = 5/392 (1%) Query: 9 LRGTLDQIRADGFYKTEREIASPQAADIRLAG-GAHVLNFCANNYLGLADDSRLIAAAQA 67 L G L+ IR G +K+ER I S Q IR+ G +LNFCANNYLGL+ +I A Sbjct: 31 LEGELEGIRGAGTWKSERVITSRQGPHIRVDGVSGGILNFCANNYLGLSSHPEVIQAGLQ 90 Query: 68 ALEQDGFGMASVRFICGTQTVHKQLEAALSAFLKTDDCILYSSCFDANGGLFETLLDEND 127 ALE+ G G++SVRFICGTQ++HK LEA ++ F + +D ILY SC+DAN GLFE LL D Sbjct: 91 ALEEFGAGLSSVRFICGTQSIHKNLEAKIARFHQREDAILYPSCYDANAGLFEALLTPED 150 Query: 128 AVISDELNHASIIDGVRLSKAKRFRYKNNDLADLEAKLREADAAGARFKLIATDGVFSMD 187 AV+SDELNHASIIDG+RL KA ++RY++ D+ADLEAKL+EA R +L+ATDG FSMD Sbjct: 151 AVLSDELNHASIIDGIRLCKAHKYRYRHLDMADLEAKLQEAQK--HRLRLVATDGAFSMD 208 Query: 188 GIIANLKGVCDLADRYGALVMVDDSHAVGFIGEHGRGTPEHCGVEGRVDIITGTLGKALG 247 G IA L+ +C LA RYGALV +D+ HA GF+G GRGT E GV +V II TLGKALG Sbjct: 209 GDIAPLQEICCLASRYGALVFMDECHATGFLGPTGRGTDELLGVMDQVTIINSTLGKALG 268 Query: 248 GASGGYVAARREIVELLRQRSRPYLFSNTLTPSIAAASLKVLELLASDEGARLRERVRAN 307 GASGGY +V LLRQR+RPYLFSN+L P++ + K L+LL + + + A Sbjct: 269 GASGGYTTGPGPLVSLLRQRARPYLFSNSLPPAVVGCASKALDLLMGSN--TIVQSMAAK 326 Query: 308 GVHFRERMSAAGFMLVPGEHPIIPVMLGDAQVASKMADALLAEGVYVIGFSYPVVPRGRA 367 FR +M AAGF + HPI PVMLGDA++AS+MAD +L G++VIGFSYPVVP+G+A Sbjct: 327 TQRFRSKMEAAGFTISGASHPICPVMLGDARLASRMADDMLKRGIFVIGFSYPVVPKGKA 386 Query: 368 RIRTQMSAAHTPEQIDRAADAFVRVGKTLGVI 399 RIR Q+SA H+ E IDR +AFV VG+ G + Sbjct: 387 RIRVQISAVHSEEDIDRCVEAFVEVGRLHGAL 418 >ENSP00000364116 pep:known-ccds chromosome:NCBI36:X:55052213:55074135:-1 gene:ENSG00000158578 transcript:ENST00000374977 CCDS35303.1 Length = 550 Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 126/355 (35%), Positives = 207/355 (58%), Gaps = 6/355 (1%) Query: 47 FCANNYLGLADDSRLIAAAQAALEQDGFGMASVRFICGTQTVHKQLEAALSAFLKTDDCI 106 +C+N+YLG++ +++ A Q L++ G G R I GT H +LE L+ + D + Sbjct: 157 WCSNDYLGMSRHPQVLQATQETLQRHGAGAGGTRNISGTSKFHVELEQELAELHQKDSAL 216 Query: 107 LYSSCFDANGGLFETL--LDENDAVISDELNHASIIDGVRLSKAKRFRYKNNDLADLEAK 164 L+SSCF AN TL + + SD NHAS+I G+R S A +F +++ND L+ Sbjct: 217 LFSSCFVANDSTLFTLAKILPGCEIYSDAGNHASMIQGIRNSGAAKFVFRHNDPDHLKKL 276 Query: 165 LREADAAGARFKLIATDGVFSMDGIIANLKGVCDLADRYGALVMVDDSHAVGFIGEHGRG 224 L +++ K++A + V SMDG I L+ +CD++ +YGAL VD+ HAVG G G G Sbjct: 277 LEKSNPKIP--KIVAFETVHSMDGAICPLEELCDVSHQYGALTFVDEVHAVGLYGSRGAG 334 Query: 225 TPEHCGVEGRVDIITGTLGKALGGASGGYVAARREIVELLRQRSRPYLFSNTLTPSIAAA 284 E G+ ++DII+GTLGKA G GGY+A+ R++V+++R + ++F+ +L P + + Sbjct: 335 IGERDGIMHKIDIISGTLGKAF-GCVGGYIASTRDLVDMVRSYAAGFIFTTSLPPMVLSG 393 Query: 285 SLKVLELLASDEGARLRERVRANGVHFRERMSAAGFMLVPGEHPIIPVMLGDAQVASKMA 344 +L+ + LL +EG LR + N H R+ + G ++P IIP+ +G+A + SK+ Sbjct: 394 ALESVRLLKGEEGQALRRAHQRNVKHMRQLLMDRGLPVIPCPSHIIPIRVGNAALNSKLC 453 Query: 345 DALLAE-GVYVIGFSYPVVPRGRARIRTQMSAAHTPEQIDRAADAFVRVGKTLGV 398 D LL++ G+YV +YP VPRG +R S H+P+ ++ + + +G+ Sbjct: 454 DLLLSKHGIYVQAINYPTVPRGEELLRLAPSPHHSPQMMEDFVEKLLLAWTAVGL 508 >ENSP00000337131 pep:known-ccds chromosome:NCBI36:X:55052213:55074136:-1 gene:ENSG00000158578 transcript:ENST00000335854 CCDS35303.1 Length = 550 Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 126/355 (35%), Positives = 207/355 (58%), Gaps = 6/355 (1%) Query: 47 FCANNYLGLADDSRLIAAAQAALEQDGFGMASVRFICGTQTVHKQLEAALSAFLKTDDCI 106 +C+N+YLG++ +++ A Q L++ G G R I GT H +LE L+ + D + Sbjct: 157 WCSNDYLGMSRHPQVLQATQETLQRHGAGAGGTRNISGTSKFHVELEQELAELHQKDSAL 216 Query: 107 LYSSCFDANGGLFETL--LDENDAVISDELNHASIIDGVRLSKAKRFRYKNNDLADLEAK 164 L+SSCF AN TL + + SD NHAS+I G+R S A +F +++ND L+ Sbjct: 217 LFSSCFVANDSTLFTLAKILPGCEIYSDAGNHASMIQGIRNSGAAKFVFRHNDPDHLKKL 276 Query: 165 LREADAAGARFKLIATDGVFSMDGIIANLKGVCDLADRYGALVMVDDSHAVGFIGEHGRG 224 L +++ K++A + V SMDG I L+ +CD++ +YGAL VD+ HAVG G G G Sbjct: 277 LEKSNPKIP--KIVAFETVHSMDGAICPLEELCDVSHQYGALTFVDEVHAVGLYGSRGAG 334 Query: 225 TPEHCGVEGRVDIITGTLGKALGGASGGYVAARREIVELLRQRSRPYLFSNTLTPSIAAA 284 E G+ ++DII+GTLGKA G GGY+A+ R++V+++R + ++F+ +L P + + Sbjct: 335 IGERDGIMHKIDIISGTLGKAF-GCVGGYIASTRDLVDMVRSYAAGFIFTTSLPPMVLSG 393 Query: 285 SLKVLELLASDEGARLRERVRANGVHFRERMSAAGFMLVPGEHPIIPVMLGDAQVASKMA 344 +L+ + LL +EG LR + N H R+ + G ++P IIP+ +G+A + SK+ Sbjct: 394 ALESVRLLKGEEGQALRRAHQRNVKHMRQLLMDRGLPVIPCPSHIIPIRVGNAALNSKLC 453 Query: 345 DALLAE-GVYVIGFSYPVVPRGRARIRTQMSAAHTPEQIDRAADAFVRVGKTLGV 398 D LL++ G+YV +YP VPRG +R S H+P+ ++ + + +G+ Sbjct: 454 DLLLSKHGIYVQAINYPTVPRGEELLRLAPSPHHSPQMMEDFVEKLLLAWTAVGL 508 >ENSP00000332369 pep:known-ccds chromosome:NCBI36:X:55052213:55074136:-1 gene:ENSG00000158578 transcript:ENST00000330807 CCDS14366.1 Length = 587 Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 126/355 (35%), Positives = 207/355 (58%), Gaps = 6/355 (1%) Query: 47 FCANNYLGLADDSRLIAAAQAALEQDGFGMASVRFICGTQTVHKQLEAALSAFLKTDDCI 106 +C+N+YLG++ +++ A Q L++ G G R I GT H +LE L+ + D + Sbjct: 194 WCSNDYLGMSRHPQVLQATQETLQRHGAGAGGTRNISGTSKFHVELEQELAELHQKDSAL 253 Query: 107 LYSSCFDANGGLFETL--LDENDAVISDELNHASIIDGVRLSKAKRFRYKNNDLADLEAK 164 L+SSCF AN TL + + SD NHAS+I G+R S A +F +++ND L+ Sbjct: 254 LFSSCFVANDSTLFTLAKILPGCEIYSDAGNHASMIQGIRNSGAAKFVFRHNDPDHLKKL 313 Query: 165 LREADAAGARFKLIATDGVFSMDGIIANLKGVCDLADRYGALVMVDDSHAVGFIGEHGRG 224 L +++ K++A + V SMDG I L+ +CD++ +YGAL VD+ HAVG G G G Sbjct: 314 LEKSNPKIP--KIVAFETVHSMDGAICPLEELCDVSHQYGALTFVDEVHAVGLYGSRGAG 371 Query: 225 TPEHCGVEGRVDIITGTLGKALGGASGGYVAARREIVELLRQRSRPYLFSNTLTPSIAAA 284 E G+ ++DII+GTLGKA G GGY+A+ R++V+++R + ++F+ +L P + + Sbjct: 372 IGERDGIMHKIDIISGTLGKAF-GCVGGYIASTRDLVDMVRSYAAGFIFTTSLPPMVLSG 430 Query: 285 SLKVLELLASDEGARLRERVRANGVHFRERMSAAGFMLVPGEHPIIPVMLGDAQVASKMA 344 +L+ + LL +EG LR + N H R+ + G ++P IIP+ +G+A + SK+ Sbjct: 431 ALESVRLLKGEEGQALRRAHQRNVKHMRQLLMDRGLPVIPCPSHIIPIRVGNAALNSKLC 490 Query: 345 DALLAE-GVYVIGFSYPVVPRGRARIRTQMSAAHTPEQIDRAADAFVRVGKTLGV 398 D LL++ G+YV +YP VPRG +R S H+P+ ++ + + +G+ Sbjct: 491 DLLLSKHGIYVQAINYPTVPRGEELLRLAPSPHHSPQMMEDFVEKLLLAWTAVGL 545 >ENSP00000309259 pep:known-ccds chromosome:NCBI36:3:52207156:52223383:1 gene:ENSG00000023330 transcript:ENST00000310271 CCDS2847.1 Length = 640 Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 129/396 (32%), Positives = 212/396 (53%), Gaps = 13/396 (3%) Query: 13 LDQIRADGFYKTEREIAS-----PQAADIR--LAGGAHVLNFCANNYLGLADDSRLIAAA 65 +D+ + D Y+ + + P A D L V +C+N+YLG++ R+ A Sbjct: 207 IDEKKNDHTYRVFKTVNRRAHIFPMADDYSDSLITKKQVSVWCSNDYLGMSRHPRVCGAV 266 Query: 66 QAALEQDGFGMASVRFICGTQTVHKQLEAALSAFLKTDDCILYSSCFDANGGLFETL--L 123 L+Q G G R I GT H LE L+ D +L+SSCF AN TL + Sbjct: 267 MDTLKQHGAGAGGTRNISGTSKFHVDLERELADLHGKDAALLFSSCFVANDSTLFTLAKM 326 Query: 124 DENDAVISDELNHASIIDGVRLSKAKRFRYKNNDLADLEAKLREADAAGARFKLIATDGV 183 + SD NHAS+I G+R S+ ++ +++ND++ L L+ +D + K++A + V Sbjct: 327 MPGCEIYSDSGNHASMIQGIRNSRVPKYIFRHNDVSHLRELLQRSDPSVP--KIVAFETV 384 Query: 184 FSMDGIIANLKGVCDLADRYGALVMVDDSHAVGFIGEHGRGTPEHCGVEGRVDIITGTLG 243 SMDG + L+ +CD+A +GA+ VD+ HAVG G G G + GV ++DII+GTLG Sbjct: 385 HSMDGAVCPLEELCDVAHEFGAITFVDEVHAVGLYGARGGGIGDRDGVMPKMDIISGTLG 444 Query: 244 KALGGASGGYVAARREIVELLRQRSRPYLFSNTLTPSIAAASLKVLELLASDEGARLRER 303 KA G GGY+A+ +++ +R + ++F+ +L P + A +L+ + +L S EG LR + Sbjct: 445 KAFGCV-GGYIASTSSLIDTVRSYAAGFIFTTSLPPMLLAGALESVRILKSAEGRVLRRQ 503 Query: 304 VRANGVHFRERMSAAGFMLVPGEHPIIPVMLGDAQVASKMADALLA-EGVYVIGFSYPVV 362 + N R+ + AG +V IIPV + DA +++ D L++ +YV +YP V Sbjct: 504 HQRNVKLMRQMLMDAGLPVVHCPSHIIPVRVADAAKNTEVCDELMSRHNIYVQAINYPTV 563 Query: 363 PRGRARIRTQMSAAHTPEQIDRAADAFVRVGKTLGV 398 PRG +R + HTP+ ++ + + K +G+ Sbjct: 564 PRGEELLRIAPTPHHTPQMMNYFLENLLVTWKQVGL 599 >ENSP00000371110 pep:known chromosome:NCBI36:22:36533891:36543129:1 gene:ENSG00000100116 transcript:ENST00000323205 Length = 247 Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 101/203 (49%), Positives = 129/203 (63%), Gaps = 29/203 (14%) Query: 9 LRGTLDQIRADGFYKTEREIASPQAADIRLAG---------------------------G 41 L G L+ IR G +K+ER I S Q IR+ G Sbjct: 31 LEGELEGIRGAGTWKSERVITSRQGPHIRVDGVSGGPGTVIFPGLPLPHLSCCIHLLSFT 90 Query: 42 AHVLNFCANNYLGLADDSRLIAAAQAALEQDGFGMASVRFICGTQTVHKQLEAALSAFLK 101 + +LNFCANNYLGL+ +I A ALE+ G G++SVRFICGTQ++HK LEA ++ F + Sbjct: 91 SGILNFCANNYLGLSSHPEVIQAGLQALEEFGAGLSSVRFICGTQSIHKNLEAKIARFHQ 150 Query: 102 TDDCILYSSCFDANGGLFETLLDENDAVISDELNHASIIDGVRLSKAKRFRYKNNDLADL 161 +D ILY SC+DAN GLFE LL DAV+SDELNHASIIDG+RL KA ++RY++ D+ADL Sbjct: 151 REDAILYPSCYDANAGLFEALLTPEDAVLSDELNHASIIDGIRLCKAHKYRYRHLDMADL 210 Query: 162 EAKLREADAAGARFKLIATDGVF 184 EAKL+EA R +L+ATDG F Sbjct: 211 EAKLQEAQK--HRLRLVATDGAF 231 >ENSP00000367436 pep:known chromosome:NCBI36:20:12937642:13093118:1 gene:ENSG00000172296 transcript:ENST00000378194 Length = 523 Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 115/356 (32%), Positives = 198/356 (55%), Gaps = 19/356 (5%) Query: 44 VLNFCANNYLGLA---DDSRLIAAAQAALEQDGFGMASVRFICGTQTVHKQLEAALSAFL 100 V+N + N+LGLA D+S + + LE G G+AS R GT HK+LE ++ FL Sbjct: 162 VINMGSYNFLGLAAKYDES--MRTIKDVLEVYGTGVASTRHEMGTLDKHKELEDLVAKFL 219 Query: 101 KTDDCILYSSCFDANGGLFETLLDENDAVISDELNHASIIDGVRLSKAKRFRYKNNDLAD 160 + +++ F N L+ + ++SDELNH S++ G RLS A +K+N+ Sbjct: 220 NVEAAMVFGMGFATNSMNIPALVGKGCLILSDELNHTSLVLGARLSGATIRIFKHNNTQS 279 Query: 161 LEAKLREADAAG-------ARFKLIATDGVFSMDGIIANLKGVCDLADRYGALVMVDDSH 213 LE LR+A G + LI +GV+SM+G I +L + L +Y A + +D++H Sbjct: 280 LEKLLRDAVIYGQPRTRRAWKKILILVEGVYSMEGSIVHLPQIIALKKKYKAYLYIDEAH 339 Query: 214 AVGFIGEHGRGTPEHCGVEGR-VDIITGTLGKALGGASGGYVAARREIVELLRQRSRPYL 272 ++G +G GRG E G++ VD++ GT K+ GASGGY+A R+++V+ LR S + Sbjct: 340 SIGAVGPTGRGVTEFFGLDPHEVDVLMGTFTKSF-GASGGYIAGRKDLVDYLRVHSHSAV 398 Query: 273 FSNTLTPSIAAASLKVLELL----ASDEGARLRERVRANGVHFRERMSAAGFMLVPGEH- 327 ++++++P IA ++ L+L+ + +G + +++ N +FR+R+ GF++ E+ Sbjct: 399 YASSMSPPIAEQIIRSLKLIMGLDGTTQGLQRVQQLAKNTRYFRQRLQEMGFIIYGNENA 458 Query: 328 PIIPVMLGDAQVASKMADALLAEGVYVIGFSYPVVPRGRARIRTQMSAAHTPEQID 383 ++P++L + A +L + + V+ +P P AR R +SAAHT E +D Sbjct: 459 SVVPLLLYMPGKVAAFARHMLEKKIGVVVVGFPATPLAEARARFCVSAAHTREMLD 514 >ENSP00000216484 pep:known-ccds chromosome:NCBI36:14:77043025:77152863:-1 gene:ENSG00000100596 transcript:ENST00000216484 CCDS9865.1 Length = 562 Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 113/367 (30%), Positives = 190/367 (51%), Gaps = 15/367 (4%) Query: 44 VLNFCANNYLGLADDS-RLIAAAQAALEQDGFGMASVRFICGTQTVHKQLEAALSAFLKT 102 V+N + NYLG A ++ AA LE+ G G+ S R G H++LE ++ FL Sbjct: 170 VINMGSYNYLGFARNTGSCQEAAAKVLEEYGAGVCSTRQEIGNLDKHEELEELVARFLGV 229 Query: 103 DDCILYSSCFDANGGLFETLLDENDAVISDELNHASIIDGVRLSKAKRFRYKNNDLADLE 162 + + Y F N L+ + ++SDELNHAS++ G RLS A +K+N++ LE Sbjct: 230 EAAMAYGMGFATNSMNIPALVGKGCLILSDELNHASLVLGARLSGATIRIFKHNNMQSLE 289 Query: 163 AKLREADAAG-------ARFKLIATDGVFSMDGIIANLKGVCDLADRYGALVMVDDSHAV 215 L++A G + LI +G++SM+G I L V L +Y A + +D++H++ Sbjct: 290 KLLKDAIVYGQPRTRRPWKKILILVEGIYSMEGSIVRLPEVIALKKKYKAYLYLDEAHSI 349 Query: 216 GFIGEHGRGTPEHCGVEGR-VDIITGTLGKALGGASGGYVAARREIVELLRQRSRPYLFS 274 G +G GRG E+ G++ VD++ GT K+ GASGGY+ ++E+++ LR S +++ Sbjct: 350 GALGPTGRGVVEYFGLDPEDVDVMMGTFTKSF-GASGGYIGGKKELIDYLRTHSHSAVYA 408 Query: 275 NTLTPSIAAASLKVLELLASDEGARL----RERVRANGVHFRERMSAAGFMLVPGE-HPI 329 +L+P + + ++ + +G L +++ N +FR R+ GF++ E P+ Sbjct: 409 TSLSPPVVEQIITSMKCIMGQDGTSLGKECVQQLAENTRYFRRRLKEMGFIIYGNEDSPV 468 Query: 330 IPVMLGDAQVASKMADALLAEGVYVIGFSYPVVPRGRARIRTQMSAAHTPEQIDRAADAF 389 +P+ML +L + V+ +P P +R R +SAAHT E +D A Sbjct: 469 VPLMLYMPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEI 528 Query: 390 VRVGKTL 396 VG L Sbjct: 529 DEVGDLL 535 >ENSP00000262554 pep:known-ccds chromosome:NCBI36:9:93833248:93917511:-1 gene:ENSG00000090054 transcript:ENST00000262554 CCDS6692.1 Length = 473 Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 104/391 (26%), Positives = 180/391 (46%), Gaps = 25/391 (6%) Query: 28 IASPQAADIRLAGGAHVLNFCANNYLGLADDSRLIAAAQAALEQDGFGMASVRFICGTQT 87 I S + + G +NF + N+LGL D+ R+ AAA A+L++ G G R GT Sbjct: 84 IVSGPPSHKTVVNGKECINFASFNFLGLLDNPRVKAAALASLKKYGVGTCGPRGFYGTFD 143 Query: 88 VHKQLEAALSAFLKTDDCILYSSCFDANGGLFETLLDENDAVISDELNHASIIDGVRLSK 147 VH LE L+ F+KT++ I+YS F D V D +I G++ S+ Sbjct: 144 VHLDLEDRLAKFMKTEEAIIYSYGFATIASAIPAYSKRGDIVFVDRAACFAIQKGLQASR 203 Query: 148 AKRFRYKNNDLADLEAKLREAD--------AAGARFKLIATDGVFSMDGIIANLKGVCDL 199 + +K+ND+ADLE L+E + A + I +G++ G I L + L Sbjct: 204 SDIKLFKHNDMADLERLLKEQEIEDQKNPRKARVTRRFIVVEGLYMNTGTICPLPELVKL 263 Query: 200 ADRYGALVMVDDSHAVGFIGEHGRGTPEHCGVE-GRVDIITGTLGKALGGASGGYVAARR 258 +Y A + +++S + G +GEHGRG EH G+ +D+I+ + AL GG+ R Sbjct: 264 KYKYKARIFLEESLSFGVLGEHGRGVTEHYGINIDDIDLISANMENALASI-GGFCCGRS 322 Query: 259 EIVELLRQRSRPYLFSNTLTPSIAAASLKVLELLASDEGARLRERVRANGVHFRER---- 314 +++ R + Y FS +L P +AAA+++ L ++ + G + + +H + Sbjct: 323 FVIDHQRLSGQGYCFSASLPPLLAAAAIEALNIMEENPGIFAVLKEKCGQIHKALQGISG 382 Query: 315 MSAAGFMLVPGEHPIIPVMLG----DAQVASKMADALLAEGVYVIGFSY-----PVVPRG 365 + G L P H + G D ++ ++ D + + + Y +P Sbjct: 383 LKVVGESLSPAFHLQLEESTGSREQDVRLLQEIVDQCMNRSIALTQARYLEKEEKCLP-- 440 Query: 366 RARIRTQMSAAHTPEQIDRAADAFVRVGKTL 396 IR ++ T E+++RAA V + + Sbjct: 441 PPSIRVVVTVEQTEEELERAASTIKEVAQAV 471 BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0006[271848] (343 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ENSP00000267814 pep:known-ccds chromosome:NCBI36:15:43102637:431... 146 3e-35 ENSP00000209668 pep:known-ccds chromosome:NCBI36:4:100416547:100... 89 1e-17 ENSP00000306606 pep:known-ccds chromosome:NCBI36:4:100445157:100... 86 8e-17 ENSP00000209665 pep:known-ccds chromosome:NCBI36:4:100552441:100... 83 4e-16 ENSP00000237653 pep:known-ccds chromosome:NCBI36:4:100344902:100... 79 8e-15 ENSP00000296412 pep:known chromosome:NCBI36:4:100212327:10022539... 72 7e-13 ENSP00000265512 pep:known-ccds chromosome:NCBI36:4:100263855:100... 64 2e-10 ENSP00000346737 pep:known chromosome:NCBI36:4:100342818:10035942... 55 1e-07 >ENSP00000267814 pep:known-ccds chromosome:NCBI36:15:43102637:43154330:1 gene:ENSG00000140263 transcript:ENST00000267814 CCDS10116.1 Length = 357 Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 93/341 (27%), Positives = 171/341 (50%), Gaps = 8/341 (2%) Query: 4 LAKLERGPG-LTLTRVKKPEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVG 62 L+ + GPG L L PE G N+VL+++ ICG+D+H W++ + PM +G Sbjct: 10 LSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLG 69 Query: 63 HEYVGEIVEMGQEVRGFSIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAF 121 HE G + ++G V+ GDRV+ E C+ GR +L + +G Sbjct: 70 HEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNL 129 Query: 122 AEYLAIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNL-VGEDVLITGAGPIGVMAV 180 + A +K+P ++ + A+ +P H + +G VL+ GAGPIG++ + Sbjct: 130 CRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTL 189 Query: 181 AIAKHVGARNVVITDINDYRLDLARRMGATRAVNVSRESLRDVMADLHMTEGF--DVGLE 238 +AK +GA VV+TD++ RL A+ +GA + +S+ES +++ + G +V +E Sbjct: 190 LVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIE 249 Query: 239 MSGVPSAFTSLLESMNHGGKVALLGIPPAQTAIDWNQVIFKGLEIKGIYGREMFETWYKM 298 +G ++ + + + GG + L+G+ T + + ++IKG++ TW Sbjct: 250 CTGAEASIQAGIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGVF--RYCNTWPVA 307 Query: 299 VAMLQS-GLDLSPIITHRFAVDDYEKGFAAMLSGESGKVIL 338 ++ML S +++ P++THRF ++ + F G K++L Sbjct: 308 ISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIML 348 >ENSP00000209668 pep:known-ccds chromosome:NCBI36:4:100416547:100431165:-1 gene:ENSG00000187758 transcript:ENST00000209668 CCDS3648.1 Length = 375 Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 87/351 (24%), Positives = 150/351 (42%), Gaps = 50/351 (14%) Query: 26 NDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFSIGDRV 85 ++V IK+ ICGTD H+ P+P+ +GHE G + +G+ V GD+V Sbjct: 35 HEVRIKMVAVGICGTDDHVVS----GTMVTPLPVILGHEAAGIVESVGEGVTTVKPGDKV 90 Query: 86 SGEGHITCGFCRNCRAGRRHLC-RNTVGVGVNREGAFAE--------------YLAIPAF 130 CG CR C+ + C +N V N +G + +L I F Sbjct: 91 IPLAIPQCGKCRICKNPESNYCLKNDVS---NPQGTLQDGTSRFTCRRKPIHHFLGISTF 147 Query: 131 NAFKIPPEIS----------DDLAAIFDPFGNATHTALSFNLV--GEDVLITGAGPIGVM 178 + + + E + + + I F +A++ V G + G G +G+ Sbjct: 148 SQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLS 207 Query: 179 AVAIAKHVGARNVVITDINDYRLDLARRMGATRAVNVS--RESLRDVMADLHMTE-GFDV 235 A+ K GA ++ DIN + A+ +GAT +N ++ +++V+ + MT+ G D Sbjct: 208 AIMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKE--MTDGGVDF 265 Query: 236 GLEMSG-VPSAFTSLLESMNHGGKVALLGIPPAQTAIDWNQVIF------KGLEIKGIYG 288 E+ G + + SLL G ++G+PP + N ++ KG + G Sbjct: 266 SFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSMNPMLLLTGRTWKGAILGGFKS 325 Query: 289 REMFETWYKMVA-MLQSGLDLSPIITHRFAVDDYEKGFAAMLSGESGKVIL 338 +E K+VA + L +ITH + +GF + SG+S + IL Sbjct: 326 KECVP---KLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSIRTIL 373 >ENSP00000306606 pep:known-ccds chromosome:NCBI36:4:100445157:100461579:-1 gene:ENSG00000196616 transcript:ENST00000305046 CCDS34033.1 Length = 375 Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 88/346 (25%), Positives = 151/346 (43%), Gaps = 38/346 (10%) Query: 27 DVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFSIGDRVS 86 +V IK+ IC TD H+ + P+P+ +GHE G + +G+ V GD+V Sbjct: 36 EVRIKMVAVGICHTDDHVVSGN----LVTPLPVILGHEAAGIVESVGEGVTTVKPGDKVI 91 Query: 87 GEGHITCGFCRNCRAGRRHLC--------RNTVGVGVNREGAFAE----YLAIPAFNAFK 134 CG CR C+ + C R T+ G R + +L F+ + Sbjct: 92 PLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYT 151 Query: 135 IPPEIS----------DDLAAIFDPFGNATHTALSFNLV--GEDVLITGAGPIGVMAVAI 182 + E + + + I F +A++ V G + G G +G+ AV Sbjct: 152 VVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMG 211 Query: 183 AKHVGARNVVITDINDYRLDLARRMGATRAVNVS--RESLRDVMADLHMTE-GFDVGLEM 239 K GA ++ DIN + A+ +GAT +N ++ +++V+ + MT+ G D E+ Sbjct: 212 CKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKE--MTDGGVDFSFEV 269 Query: 240 SG-VPSAFTSLLESMNHGGKVALLGIPPAQTAIDWN-QVIFKGLEIKG-IYGR-EMFETW 295 G + + SLL G ++G+PPA + N ++ G KG +YG + E Sbjct: 270 IGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKGAVYGGFKSKEGI 329 Query: 296 YKMVA-MLQSGLDLSPIITHRFAVDDYEKGFAAMLSGESGKVILDW 340 K+VA + L +ITH + +GF + SG+S + +L + Sbjct: 330 PKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSIRTVLTF 375 >ENSP00000209665 pep:known-ccds chromosome:NCBI36:4:100552441:100575548:-1 gene:ENSG00000196344 transcript:ENST00000209665 CCDS34034.1 Length = 386 Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 92/348 (26%), Positives = 147/348 (42%), Gaps = 41/348 (11%) Query: 26 NDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFSIGDRV 85 +V IKI T IC TD H+ K ++ P+ VGHE G + +G+ V GD+V Sbjct: 47 KEVRIKILATGICRTDDHVIKGTMVSK----FPVIVGHEATGIVESIGEGVTTVKPGDKV 102 Query: 86 SGEGHITCGFCRNCRAGRRHLC--RNTVGVGVNREGA------------------FAEYL 125 C C CR +LC + G GV +G F EY Sbjct: 103 IPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEYT 162 Query: 126 AIPAFNAFKI----PPEISDDLAAIFDP-FGNATHTALSFNLVGEDVLITGAGPIGVMAV 180 + + KI PPE + F +G A T G ++ G G +G+ + Sbjct: 163 VVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKP--GSTCVVFGLGGVGLSVI 220 Query: 181 AIAKHVGARNVVITDINDYRLDLARRMGATRAVNVSRESLRDVMADLHMTEGFDVG--LE 238 K GA ++ D+N + + A +GAT ++ ++S + + L G +VG E Sbjct: 221 MGCKSAGASRIIGIDLNKDKFEKAMAVGATECIS-PKDSTKPISEVLSEMTGNNVGYTFE 279 Query: 239 MSGVPSAFTSLLES--MNHGGKVALLGIPPAQTAIDWN-QVIFKGLEIKGIY--GREMFE 293 + G L S MN+G V ++G+PP+ + ++ ++F G KG G + + Sbjct: 280 VIGHLETMIDALASCHMNYGTSV-VVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRD 338 Query: 294 TWYKMVA-MLQSGLDLSPIITHRFAVDDYEKGFAAMLSGESGKVILDW 340 K+V L DL +ITH +GF + SG+S + +L + Sbjct: 339 DVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFELLNSGQSIRTVLTF 386 >ENSP00000237653 pep:known-ccds chromosome:NCBI36:4:100344902:100359424:-1 gene:ENSG00000172955 transcript:ENST00000237653 CCDS3647.1 Length = 368 Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 90/346 (26%), Positives = 143/346 (41%), Gaps = 52/346 (15%) Query: 26 NDVLIKIRRTAICGTDIHIW--KWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFSIGD 83 +V IK+ T +CGT++ + K D TI +GHE G + +G+ V GD Sbjct: 35 KEVRIKVVATGLCGTEMKVLGSKHLDLLYPTI-----LGHEGAGIVESIGEGVSTVKPGD 89 Query: 84 RVSGEGHITCGFCRNCRAGRRHLC-------RNTVGVGVNR-------------EGAFAE 123 +V CG C +C + C + G +R F E Sbjct: 90 KVITLFLPQCGECTSCLNSEGNFCIQFKQSKTQLMSDGTSRFTCKGKSIYHFGNTSTFCE 149 Query: 124 YLAIPAFNAFKI----PPEISDDLAAIFDP-FGNATHTALSFNLVGEDVLITGAGPIGVM 178 Y I + KI P E ++ F FG A +TA G + G G +G+ Sbjct: 150 YTVIKEISVAKIDAVAPLEKVCLISCGFSTGFGAAINTAKVTP--GSTCAVFGLGGVGLS 207 Query: 179 AVAIAKHVGARNVVITDINDYRLDLARRMGATRAVNVS--RESLRDVMADLHMTE-GFDV 235 V K GA ++ D+N + A+ +GAT +N ++ +++V+ D MT+ G D Sbjct: 208 VVMGCKAAGAARIIGVDVNKEKFKKAQELGATECLNPQDLKKPIQEVLFD--MTDAGIDF 265 Query: 236 GLEMSGVPSAFTSLLESMNHG-GKVALLGIPPAQTAIDWN-QVIFKGLEIKGIYGREMFE 293 E G + L S N G ++G+ PA + + Q+ F G +KG +F Sbjct: 266 CFEAIGNLDVLAAALASCNESYGVCVVVGVLPASVQLKISGQLFFSGRSLKG----SVFG 321 Query: 294 TWY------KMVA-MLQSGLDLSPIITHRFAVDDYEKGFAAMLSGE 332 W K+VA + L+L P+ITH +D + M +G+ Sbjct: 322 GWKSRQHIPKLVADYMAEKLNLDPLITHTLNLDKINEAVELMKTGK 367 >ENSP00000296412 pep:known chromosome:NCBI36:4:100212327:100225399:-1 gene:ENSG00000197894 transcript:ENST00000296412 Length = 373 Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 92/379 (24%), Positives = 152/379 (40%), Gaps = 57/379 (15%) Query: 2 KALAKLERGPGLTLTRVKKPEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHV 61 KA E G L++ ++ ++V IKI TA+C TD + D + PV + Sbjct: 8 KAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGAD-PEGCFPVIL-- 64 Query: 62 GHEYVGEIVEMGQEVRGFSIGDRVSGEGHITCGFCRNCRAGRRHLC---RNTVGVGVNRE 118 GHE G + +G+ V GD V CG C+ C + +LC R T G G+ + Sbjct: 65 GHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPD 124 Query: 119 GA------------------FAEYLAIPAFNAFKIPPEISDDLAAIF-----DPFGNATH 155 G F+EY + + KI P D + +G A + Sbjct: 125 GTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVN 184 Query: 156 TALSFNLVGEDVLITGAGPIGVMAVAIAKHVGARNVVITDINDYRLDLARRMGATRAVNV 215 TA G + G G +G+ + K GA ++ DIN + A+ GAT +N Sbjct: 185 TAKLEP--GSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINP 242 Query: 216 S--RESLRDVMADLHMTE-GFDVGLEMSGVPSAFTSLLESMNHGGKVAL----------L 262 + +++V+ + MT+ G D E G + LE+ + G V++ + Sbjct: 243 QDFSKPIQEVL--IEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEI 300 Query: 263 GIPPAQ--TAIDWNQVIFKGLEIKGIYGREMFETWYKMVA-MLQSGLDLSPIITHRFAVD 319 P Q T W F G + E+ K+V+ + + + +TH + D Sbjct: 301 ATRPFQLVTGRTWKGTAFGGW--------KSVESVPKLVSEYMSKKIKVDEFVTHNLSFD 352 Query: 320 DYEKGFAAMLSGESGKVIL 338 + K F M SG+S + ++ Sbjct: 353 EINKAFELMHSGKSIRTVV 371 >ENSP00000265512 pep:known-ccds chromosome:NCBI36:4:100263855:100284472:-1 gene:ENSG00000198099 transcript:ENST00000265512 CCDS34032.1 Length = 380 Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 82/373 (21%), Positives = 149/373 (39%), Gaps = 41/373 (10%) Query: 2 KALAKLERGPGLTLTRVKKPEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHV 61 KA E G L + V+ ++V I+I T++C TD + D + + P+ V Sbjct: 11 KAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVI---DSKFEGLAFPVIV 67 Query: 62 GHEYVGEIVEMGQEVRGFSIGDRVSGEGHITCGFCRNCRAGRRHLC---RNTVGVGVNRE 118 GHE G + +G V GD+V C C+ C + +LC N +++ Sbjct: 68 GHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASDQQ 127 Query: 119 ----------------------GAFAEYLAIPAFNAFKIPPEISDDLAAIFDPFGNATHT 156 F++Y + N KI + + + + G +T Sbjct: 128 LMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLG-CGFSTGY 186 Query: 157 ALSFN----LVGEDVLITGAGPIGVMAVAIAKHVGARNVVITDINDYRLDLARRMGATRA 212 + N G + G G +G+ AV K GA ++ DIN + A+ +GAT Sbjct: 187 GAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATDC 246 Query: 213 VNVS--RESLRDVMADLHMTEGFDVGLEMSGVPSAFTSLLESMNHG-GKVALLGIPPAQT 269 +N + +++V+ +L G D L+ +G + L+ G G +G+ Sbjct: 247 LNPRDLHKPIQEVIIEL-TKGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAAGSK 305 Query: 270 AID-WNQVIFKGLEIKGIY--GREMFETWYKMVAMLQS-GLDLSPIITHRFAVDDYEKGF 325 + + + + G I G + G + ++ K+V ++ +L ++TH D + F Sbjct: 306 GLTIFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFDKISEAF 365 Query: 326 AAMLSGESGKVIL 338 M G+S + IL Sbjct: 366 DLMNQGKSVRTIL 378 >ENSP00000346737 pep:known chromosome:NCBI36:4:100342818:100359426:-1 gene:ENSG00000172955 transcript:ENST00000354704 Length = 295 Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/246 (26%), Positives = 100/246 (40%), Gaps = 39/246 (15%) Query: 26 NDVLIKIRRTAICGTDIHIW--KWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFSIGD 83 +V IK+ T +CGT++ + K D TI +GHE G + +G+ V GD Sbjct: 35 KEVRIKVVATGLCGTEMKVLGSKHLDLLYPTI-----LGHEGAGIVESIGEGVSTVKPGD 89 Query: 84 RVSGEGHITCGFCRNCRAGRRHLC-------RNTVGVGVNR-------------EGAFAE 123 +V CG C +C + C + G +R F E Sbjct: 90 KVITLFLPQCGECTSCLNSEGNFCIQFKQSKTQLMSDGTSRFTCKGKSIYHFGNTSTFCE 149 Query: 124 YLAIPAFNAFKI----PPEISDDLAAIFDP-FGNATHTALSFNLVGEDVLITGAGPIGVM 178 Y I + KI P E ++ F FG A +TA G + G G +G+ Sbjct: 150 YTVIKEISVAKIDAVAPLEKVCLISCGFSTGFGAAINTAKV--TPGSTCAVFGLGGVGLS 207 Query: 179 AVAIAKHVGARNVVITDINDYRLDLARRMGATRAVNVS--RESLRDVMADLHMTE-GFDV 235 V K GA ++ D+N + A+ +GAT +N ++ +++V+ D MT+ G D Sbjct: 208 VVMGCKAAGAARIIGVDVNKEKFKKAQELGATECLNPQDLKKPIQEVLFD--MTDAGIDF 265 Query: 236 GLEMSG 241 E G Sbjct: 266 CFEAIG 271 BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0007[271848] (182 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0008[271848] (215 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0009[271848] (216 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0010[271848] (205 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0011[271848] (159 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0012[271848] (330 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0013[271848] (361 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ENSP00000299518 pep:known-ccds chromosome:NCBI36:15:76228774:762... 177 1e-44 ENSP00000217901 pep:known-ccds chromosome:NCBI36:X:152704415:152... 127 1e-29 ENSP00000370247 pep:known chromosome:NCBI36:20:2587040:2592835:-... 124 2e-28 ENSP00000370223 pep:known-ccds chromosome:NCBI36:20:2587041:2592... 124 2e-28 ENSP00000370232 pep:known-ccds chromosome:NCBI36:20:2587041:2592... 123 4e-28 ENSP00000359111 pep:known chromosome:NCBI36:X:152704416:15271303... 116 4e-26 ENSP00000359110 pep:known chromosome:NCBI36:X:152704418:15271316... 65 1e-10 >ENSP00000299518 pep:known-ccds chromosome:NCBI36:15:76228774:76249938:1 gene:ENSG00000166411 transcript:ENST00000299518 CCDS10297.1 Length = 366 Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 120/362 (33%), Positives = 183/362 (50%), Gaps = 37/362 (10%) Query: 5 VYRIAVIPGDGIGVEVMPEGLRALDAVSRRFGLRFEYEPIEWASCGYYAKHGQ----MMP 60 V + +IPGDGIG E+ ++ DA PI+W A G M+P Sbjct: 31 VQTVTLIPGDGIGPEISAAVMKIFDAAK---------APIQWEERNVTAIQGPGGKWMIP 81 Query: 61 DDWKAQLSGMDALLFGAVGWPETVPDHVSLWGSLIKFRREFDQYVNLRPARLFDGVPCPL 120 + K + L G + P H S+ + R+ FD Y N+RP +G P Sbjct: 82 SEAKESMDKNKMGLKGPLKTP-IAAGHPSMN---LLLRKTFDLYANVRPCVSIEGYKTPY 137 Query: 121 AGRKAGDIDFMIVRENTEGEYSAVGGTMFEGTEREFVVQQ-AVFTRHGTERVMKFAFELA 179 D++ + +RENTEGEYS + + +G VVQ + T ++R+ +FAFE A Sbjct: 138 T-----DVNIVTIRENTEGEYSGIEHVIVDG-----VVQSIKLITEGASKRIAEFAFEYA 187 Query: 180 QRRAK-RLTVATKSNGIAISMPWWDARAAEMAARYPDVAWDKQHIDILCARFVMQPDRFD 238 + + +T K+N + +S + + E+A D+ +++ ++D +C V P +FD Sbjct: 188 RNNHRSNVTAVHKANIMRMSDGLFLQKCREVAESCKDIKFNEMYLDTVCLNMVQDPSQFD 247 Query: 239 VVVASNLFGDILSDLGPACTGTIGIAPSANLNPERNFPSLFEPVHGSAPDIAGKQVANPI 298 V+V NL+GDILSDL G +G+ PS N+ N ++FE VHG+APDIAGK +ANP Sbjct: 248 VLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGA--NGVAIFESVHGTAPDIAGKDMANPT 305 Query: 299 AMIWSAAMMIDFLGEGAGPAREAHDAIVAAIEHVLKHGPR-TRDMGGQASTSEVGDAIVA 357 A++ SA MM+ +G AR I AA +K G T+D+GG A S+ + I Sbjct: 306 ALLLSAVMMLRHMGLFDHAAR-----IEAACFATIKDGKSLTKDLGGNAKCSDFTEEICR 360 Query: 358 RL 359 R+ Sbjct: 361 RV 362 >ENSP00000217901 pep:known-ccds chromosome:NCBI36:X:152704415:152713172:-1 gene:ENSG00000067829 transcript:ENST00000217901 CCDS14730.1 Length = 393 Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/351 (28%), Positives = 168/351 (47%), Gaps = 37/351 (10%) Query: 6 YRIAVIPGDGIGVEVMPEGLRALDAVSRRFGLRFEYEPIEWASCGYYAKHGQMMPDDWKA 65 + + +IPGDGIG PE + + +V R + ++E + +S +D + Sbjct: 55 HTVTMIPGDGIG----PELMLHVKSVFRHACVPVDFEEVHVSS--------NADEEDIRN 102 Query: 66 QLSGMDALLFGAVGWPETV----PDHVSLWGSLIKFRREFDQYVNLRPARLFDGVPCPLA 121 + + G ET P H S L R D Y N+ + GV Sbjct: 103 AIMAIRRNRVALKGNIETNHNLPPSHKSRNNIL---RTSLDLYANVIHCKSLPGVVT--- 156 Query: 122 GRKAGDIDFMIVRENTEGEYSAVGGTMFEGTEREFVVQQAVFTRHGTERVMKFAFELAQR 181 + DID +IVRENTEGEYS++ G V + T+ + R+ ++AF+LAQ Sbjct: 157 --RHKDIDILIVRENTEGEYSSLEHESVAG----VVESLKIITKAKSLRIAEYAFKLAQE 210 Query: 182 RA-KRLTVATKSNGIAISMPWWDARAAEMAARYPDVAWDKQHIDILCARFVMQPDRFDVV 240 K++T K+N + + + E+AARYP + ++ +D + V +P +FDV+ Sbjct: 211 SGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVM 270 Query: 241 VASNLFGDILSDLGPACTGTIGIAPSANLNPERNFPSLFEP-VHGSAPDIAGKQVANPIA 299 V NL+G+I++++ G G+ AN + ++FE + IA K +ANP A Sbjct: 271 VMPNLYGNIVNNVCAGLVGGPGLVAGANYG---HVYAVFETATRNTGKSIANKNIANPTA 327 Query: 300 MIWSAAMMIDFLGEGAGPAREAHDAIVAAIEHVLKHGPRTRDMGGQASTSE 350 + ++ MM+D L + A A++A++++ H P D+GGQ +TSE Sbjct: 328 TLLASCMMLDHL-KLHSYATSIRKAVLASMDNENMHTP---DIGGQGTTSE 374 >ENSP00000370247 pep:known chromosome:NCBI36:20:2587040:2592835:-1 gene:ENSG00000101365 transcript:ENST00000380865 Length = 387 Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 94/360 (26%), Positives = 174/360 (48%), Gaps = 38/360 (10%) Query: 8 IAVIPGDGIGVEVMPEGLRALDAVSRRFGLRFEYEPIEWASCGYYAKHGQMMPDDWKAQ- 66 + ++PGDG+G PE + A+ V + + E++ ++ Q M + K + Sbjct: 51 VTMLPGDGVG----PELMHAVKEVFKAAAVPVEFQE-------HHLSEVQNMASEEKLEQ 99 Query: 67 -LSGMDALLFGAVGWPETVPDHVSLWGSL-IKFRREFDQYVNLRPARLFDGVPCPLAGRK 124 LS M +G T ++ S ++ RR+ D + N+ + G + Sbjct: 100 VLSSMKENKVAIIGKIHTPMEYKGELASYDMRLRRKLDLFANVVHVKSLPGYMT-----R 154 Query: 125 AGDIDFMIVRENTEGEYSAVGGTMFEGTEREFVVQQAVFTRHGTERVMKFAFELAQRRAK 184 ++D +I+RE TEGEYS ++ + R + + TR ++R+ KFAF+ A ++ + Sbjct: 155 HNNLDLVIIREQTEGEYS----SLEHESARGVIECLKIVTRAKSQRIAKFAFDYATKKGR 210 Query: 185 -RLTVATKSNGIAISMPWWDARAAEMAARYPDVAWDKQHIDILCARFVMQPDRFDVVVAS 243 ++T K+N + + + E+A YP + ++ ID C + V P +FDV+V Sbjct: 211 GKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMP 270 Query: 244 NLFGDILSDLGPACTGTIGIAPSANLNPERNFPSLFEP--VHGSAPDIAGKQVANPIAMI 301 NL+G+I+ +L G G+ P + + E ++FE H A + G+ +ANP AM+ Sbjct: 271 NLYGNIIDNLAAGLVGGAGVVPGESYSAEY---AVFETGARHPFAQAV-GRNIANPTAML 326 Query: 302 WSAAMMIDFLGEGAGPAREAHDAIV--AAIEHVLKHGPRTRDMGGQASTSEVGDAIVARL 359 SA+ M+ L E H +++ A + + RTRDMGG ++T++ +++ L Sbjct: 327 LSASNMLRHLN------LEYHSSMIADAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHL 380 >ENSP00000370223 pep:known-ccds chromosome:NCBI36:20:2587041:2592862:-1 gene:ENSG00000101365 transcript:ENST00000380843 CCDS13032.1 Length = 385 Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 94/360 (26%), Positives = 174/360 (48%), Gaps = 38/360 (10%) Query: 8 IAVIPGDGIGVEVMPEGLRALDAVSRRFGLRFEYEPIEWASCGYYAKHGQMMPDDWKAQ- 66 + ++PGDG+G PE + A+ V + + E++ ++ Q M + K + Sbjct: 51 VTMLPGDGVG----PELMHAVKEVFKAAAVPVEFQE-------HHLSEVQNMASEEKLEQ 99 Query: 67 -LSGMDALLFGAVGWPETVPDHVSLWGSL-IKFRREFDQYVNLRPARLFDGVPCPLAGRK 124 LS M +G T ++ S ++ RR+ D + N+ + G + Sbjct: 100 VLSSMKENKVAIIGKIHTPMEYKGELASYDMRLRRKLDLFANVVHVKSLPGYMT-----R 154 Query: 125 AGDIDFMIVRENTEGEYSAVGGTMFEGTEREFVVQQAVFTRHGTERVMKFAFELAQRRAK 184 ++D +I+RE TEGEYS ++ + R + + TR ++R+ KFAF+ A ++ + Sbjct: 155 HNNLDLVIIREQTEGEYS----SLEHESARGVIECLKIVTRAKSQRIAKFAFDYATKKGR 210 Query: 185 -RLTVATKSNGIAISMPWWDARAAEMAARYPDVAWDKQHIDILCARFVMQPDRFDVVVAS 243 ++T K+N + + + E+A YP + ++ ID C + V P +FDV+V Sbjct: 211 GKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMP 270 Query: 244 NLFGDILSDLGPACTGTIGIAPSANLNPERNFPSLFEP--VHGSAPDIAGKQVANPIAMI 301 NL+G+I+ +L G G+ P + + E ++FE H A + G+ +ANP AM+ Sbjct: 271 NLYGNIIDNLAAGLVGGAGVVPGESYSAEY---AVFETGARHPFAQAV-GRNIANPTAML 326 Query: 302 WSAAMMIDFLGEGAGPAREAHDAIV--AAIEHVLKHGPRTRDMGGQASTSEVGDAIVARL 359 SA+ M+ L E H +++ A + + RTRDMGG ++T++ +++ L Sbjct: 327 LSASNMLRHLN------LEYHSSMIADAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHL 380 >ENSP00000370232 pep:known-ccds chromosome:NCBI36:20:2587041:2592862:-1 gene:ENSG00000101365 transcript:ENST00000380851 CCDS13031.1 Length = 383 Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 95/362 (26%), Positives = 174/362 (48%), Gaps = 38/362 (10%) Query: 6 YRIAVIPGDGIGVEVMPEGLRALDAVSRRFGLRFEYEPIEWASCGYYAKHGQMMPDDWKA 65 + + ++PGDG+G PE + A+ V + + E++ ++ Q M + K Sbjct: 49 FPVTMLPGDGVG----PELMHAVKEVFKAAAVPVEFQE-------HHLSEVQNMASEEKL 97 Query: 66 Q--LSGMDALLFGAVGWPETVPDHVSLWGSL-IKFRREFDQYVNLRPARLFDGVPCPLAG 122 + LS M +G T ++ S ++ RR+ D + N+ + G Sbjct: 98 EQVLSSMKENKVAIIGKIHTPMEYKGELASYDMRLRRKLDLFANVVHVKSLPGYMT---- 153 Query: 123 RKAGDIDFMIVRENTEGEYSAVGGTMFEGTEREFVVQQAVFTRHGTERVMKFAFELAQRR 182 + ++D +I+RE TEGEYS ++ + R + + TR ++R+ KFAF+ A ++ Sbjct: 154 -RHNNLDLVIIREQTEGEYS----SLEHESARGVIECLKIVTRAKSQRIAKFAFDYATKK 208 Query: 183 AK-RLTVATKSNGIAISMPWWDARAAEMAARYPDVAWDKQHIDILCARFVMQPDRFDVVV 241 + ++T K+N + + + E+A YP + ++ ID C + V P +FDV+V Sbjct: 209 GRGKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLV 268 Query: 242 ASNLFGDILSDLGPACTGTIGIAPSANLNPERNFPSLFEP--VHGSAPDIAGKQVANPIA 299 NL+G+I+ +L G G+ P + + E ++FE H A + G+ +ANP A Sbjct: 269 MPNLYGNIIDNLAAGLVGGAGVVPGESYSAEY---AVFETGARHPFAQAV-GRNIANPTA 324 Query: 300 MIWSAAMMIDFLGEGAGPAREAHDAIV--AAIEHVLKHGPRTRDMGGQASTSEVGDAIVA 357 M+ SA+ M+ L E H +++ A + + RT DMGG A+ + +A++A Sbjct: 325 MLLSASNMLRHLN------LEYHSSMIADAVKKVIKVGKVRTSDMGGYATCHDFTEAVIA 378 Query: 358 RL 359 L Sbjct: 379 AL 380 >ENSP00000359111 pep:known chromosome:NCBI36:X:152704416:152713030:-1 gene:ENSG00000067829 transcript:ENST00000370093 Length = 340 Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 88/312 (28%), Positives = 147/312 (47%), Gaps = 33/312 (10%) Query: 6 YRIAVIPGDGIGVEVMPEGLRALDAVSRRFGLRFEYEPIEWASCGYYAKHGQMMPDDWKA 65 + + +IPGDGIG PE + + +V R + ++E + +S +D + Sbjct: 55 HTVTMIPGDGIG----PELMLHVKSVFRHACVPVDFEEVHVSS--------NADEEDIRN 102 Query: 66 QLSGMDALLFGAVGWPETV----PDHVSLWGSLIKFRREFDQYVNLRPARLFDGVPCPLA 121 + + G ET P H S L R D Y N+ + GV Sbjct: 103 AIMAIRRNRVALKGNIETNHNLPPSHKSRNNIL---RTSLDLYANVIHCKSLPGVVT--- 156 Query: 122 GRKAGDIDFMIVRENTEGEYSAVGGTMFEGTEREFVVQQAVFTRHGTERVMKFAFELAQR 181 + DID +IVRENTEGEYS++ G V + T+ + R+ ++AF+LAQ Sbjct: 157 --RHKDIDILIVRENTEGEYSSLEHESVAG----VVESLKIITKAKSLRIAEYAFKLAQE 210 Query: 182 RA-KRLTVATKSNGIAISMPWWDARAAEMAARYPDVAWDKQHIDILCARFVMQPDRFDVV 240 K++T K+N + + + E+AARYP + ++ +D + V +P +FDV+ Sbjct: 211 SGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVM 270 Query: 241 VASNLFGDILSDLGPACTGTIGIAPSANLNPERNFPSLFEP-VHGSAPDIAGKQVANPIA 299 V NL+G+I++++ G G+ AN + ++FE + IA K +ANP A Sbjct: 271 VMPNLYGNIVNNVCAGLVGGPGLVAGANYG---HVYAVFETATRNTGKSIANKNIANPTA 327 Query: 300 MIWSAAMMIDFL 311 + ++ MM+D L Sbjct: 328 TLLASCMMLDHL 339 >ENSP00000359110 pep:known chromosome:NCBI36:X:152704418:152713161:-1 gene:ENSG00000067829 transcript:ENST00000370092 Length = 174 Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 4/105 (3%) Query: 208 EMAARYPDVAWDKQHIDILCARFVMQPDRFDVVVASNLFGDILSDLGPACTGTIGIAPSA 267 E+AARYP + ++ +D + V +P +FDV+V NL+G+I++++ G G+ A Sbjct: 32 EVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGA 91 Query: 268 NLNPERNFPSLFEP-VHGSAPDIAGKQVANPIAMIWSAAMMIDFL 311 N + ++FE + IA K +ANP A + ++ MM+D L Sbjct: 92 NYG---HVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHL 133 BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0014[271848] (335 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0015[271848] (225 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0016[271848] (207 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ENSP00000248935 pep:known-ccds chromosome:NCBI36:22:22706142:227... 65 7e-11 ENSP00000290765 pep:known-ccds chromosome:NCBI36:22:22629609:226... 61 8e-10 ENSP00000374050 pep:known chromosome:NCBI36:22:22670745:22677253... 60 1e-09 ENSP00000215780 pep:known-ccds chromosome:NCBI36:22:22652324:226... 60 1e-09 ENSP00000367258 pep:known chromosome:NCBI36:11:62083651:62096990... 55 6e-08 ENSP00000331901 pep:known chromosome:NCBI36:11:62083651:62106622... 55 6e-08 >ENSP00000248935 pep:known-ccds chromosome:NCBI36:22:22706142:22714271:-1 gene:ENSG00000184674 transcript:ENST00000248935 CCDS13822.1 Length = 240 Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 60/127 (47%), Gaps = 8/127 (6%) Query: 44 FLALNPNGLVPVLVDGDFVLWESNAILRYLANRYGGA-HLYPVEPHARARVDQWLDWQTS 102 F +NP VP L DGDF L ES AIL YL +Y + YP + ARARVD++L WQ + Sbjct: 45 FAQVNPLKKVPALKDGDFTLTESVAILLYLTRKYKVPDYWYPQDLQARARVDEYLAWQHT 104 Query: 103 ALNRA-----WSYAFLALVRNAPDHRDPAQIRASCESWAQHMAILNAQLDATGAFVAGAD 157 L R+ W + P P + A+ + +L + AF+ G Sbjct: 105 TLRRSCLRALWHKVMFPVFLGEP--VSPQTLAATLAELDVTLQLLEDKFLQNKAFLTGPH 162 Query: 158 YTLADVA 164 +LAD+ Sbjct: 163 ISLADLV 169 >ENSP00000290765 pep:known-ccds chromosome:NCBI36:22:22629609:22633383:-1 gene:ENSG00000133433 transcript:ENST00000290765 CCDS33617.1 Length = 244 Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 11/131 (8%) Query: 40 QTPEFLALNPNGLVPVLVDGDFVLWESNAILRYLANRYGGA-HLYPVEPHARARVDQWLD 98 ++ EFL +N G +P L DGDF+L ES+AIL YL+ +Y H YP + ARARV ++L Sbjct: 41 KSKEFLQINSLGKLPTLKDGDFILTESSAILIYLSCKYQTPDHWYPSDLQARARVHEYLG 100 Query: 99 WQTSALNRA-----WSYAFLALVR-NAPDHRDPAQIRASCESWAQHMAILNAQLDATGAF 152 W + W L+ P+ + + + + Q + L + F Sbjct: 101 WHADCIRGTFGIPLWVQVLGPLIGVQVPEEK----VERNRTAMDQALQWLEDKFLGDRPF 156 Query: 153 VAGADYTLADV 163 +AG TLAD+ Sbjct: 157 LAGQQVTLADL 167 >ENSP00000374050 pep:known chromosome:NCBI36:22:22670745:22677253:-1 gene:ENSG00000185831 transcript:ENST00000389399 Length = 239 Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 6/147 (4%) Query: 22 ELELAFEREDWGAGFRSTQTPEFLALNPNGLVPVLVDGDFVLWESNAILRYLANRYGG-A 80 +++ F+ D G ++ E++ +NP +P L DG F+L ES AIL YL +Y + Sbjct: 25 DIQFNFQFVDLLKGHHHSK--EYIDINPLRKLPSLKDGKFILSESAAILYYLCRKYSAPS 82 Query: 81 HLYPVEPHARARVDQWLDWQTSALN---RAWSYAFLALVRNAPDHRDPAQIRASCESWAQ 137 H P + HARARVD+++ WQ +A + + L + + + ++ + E Sbjct: 83 HWCPPDLHARARVDEFVAWQHTAFQLPMKKIVWLKLLIPKITGEEVSAEKMEHAVEEVKN 142 Query: 138 HMAILNAQLDATGAFVAGADYTLADVA 164 + + F+ G +LAD+ Sbjct: 143 SLQLFEEYFLQDKMFITGNQISLADLV 169 >ENSP00000215780 pep:known-ccds chromosome:NCBI36:22:22652324:22656098:1 gene:ENSG00000099984 transcript:ENST00000215780 CCDS13821.1 Length = 244 Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 11/131 (8%) Query: 40 QTPEFLALNPNGLVPVLVDGDFVLWESNAILRYLANRYGGA-HLYPVEPHARARVDQWLD 98 ++ EFL +N G +P L DGDF+L ES+AIL YL+ +Y H YP + ARARV ++L Sbjct: 41 KSKEFLQINSLGKLPTLKDGDFILTESSAILIYLSCKYQTPDHWYPSDLQARARVHEYLG 100 Query: 99 WQTSALNRA-----WSYAFLALVR-NAPDHRDPAQIRASCESWAQHMAILNAQLDATGAF 152 W + W L+ P + + + + Q + L + F Sbjct: 101 WHADCIRGTFGIPLWVQVLGPLIGVQVPKEK----VERNRTAMDQALQWLEDKFLGDRPF 156 Query: 153 VAGADYTLADV 163 +AG TLAD+ Sbjct: 157 LAGQQVTLADL 167 >ENSP00000367258 pep:known chromosome:NCBI36:11:62083651:62096990:-1 gene:ENSG00000186676 transcript:ENST00000378019 Length = 436 Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 17/169 (10%) Query: 37 RSTQTPEFLALNPNGLVPVLV-DGDFVLWESNAILRYLANRYGGAHLYPVEPHARARVDQ 95 ++ +TPEFL P G VP D F ++ESNAI Y++N L P A A+V Q Sbjct: 41 QTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVSNE----ELRGSTPEAAAQVVQ 96 Query: 96 WLDWQTSAL---NRAWSYAFLALVRNAPDHRDPAQIRASCESWAQHMAILNAQLDATGAF 152 W+ + S + W + L ++ H + + E + + +L+A L T F Sbjct: 97 WVSFADSDIVPPASTWVFPTLGIM-----HHNKQATENAKEEVRRILGLLDAYLK-TRTF 150 Query: 153 VAGADYTLADVAIGLS---INRWLRTPFYKPDFPAVSAYFDRLAVRPGF 198 + G TLAD+ + + + + + P ++ FP + +F +P F Sbjct: 151 LVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQF 199 >ENSP00000331901 pep:known chromosome:NCBI36:11:62083651:62106622:-1 gene:ENSG00000186676 transcript:ENST00000329251 Length = 435 Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 17/169 (10%) Query: 37 RSTQTPEFLALNPNGLVPVLV-DGDFVLWESNAILRYLANRYGGAHLYPVEPHARARVDQ 95 ++ +TPEFL P G VP D F ++ESNAI Y++N L P A A+V Q Sbjct: 40 QTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVSNE----ELRGSTPEAAAQVVQ 95 Query: 96 WLDWQTSAL---NRAWSYAFLALVRNAPDHRDPAQIRASCESWAQHMAILNAQLDATGAF 152 W+ + S + W + L ++ H + + E + + +L+A L T F Sbjct: 96 WVSFADSDIVPPASTWVFPTLGIM-----HHNKQATENAKEEVRRILGLLDAYLK-TRTF 149 Query: 153 VAGADYTLADVAIGLS---INRWLRTPFYKPDFPAVSAYFDRLAVRPGF 198 + G TLAD+ + + + + + P ++ FP + +F +P F Sbjct: 150 LVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQF 198 BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0017[271848] (135 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0018[271848] (390 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0019[271848] (261 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ENSP00000363794 pep:known-ccds chromosome:NCBI36:6:33280397:3328... 89 4e-18 ENSP00000230236 pep:known chromosome:NCBI36:c6_QBL:33244098:3324... 89 4e-18 ENSP00000303525 pep:known-ccds chromosome:NCBI36:4:170145319:170... 89 6e-18 ENSP00000353917 pep:novel chromosome:NCBI36:4:170145319:17016799... 87 2e-17 ENSP00000256216 pep:known-ccds chromosome:NCBI36:5:118816103:118... 85 6e-17 ENSP00000326219 pep:known-ccds chromosome:NCBI36:14:23492805:235... 82 8e-16 ENSP00000351035 pep:known-ccds chromosome:NCBI36:4:88476790:8853... 80 3e-15 ENSP00000296522 pep:known-ccds chromosome:NCBI36:4:175647958:175... 80 3e-15 ENSP00000373629 pep:known-ccds chromosome:NCBI36:2:216612243:216... 79 6e-15 ENSP00000373632 pep:known-ccds chromosome:NCBI36:2:216612243:216... 79 6e-15 ENSP00000333300 pep:known-ccds chromosome:NCBI36:4:88443965:8846... 77 1e-14 ENSP00000265322 pep:known chromosome:NCBI36:2:216611357:21665470... 76 3e-14 ENSP00000372558 pep:novel chromosome:NCBI36:c6_COX:33241150:3324... 74 1e-13 ENSP00000320352 pep:known-ccds chromosome:NCBI36:17:20970850:210... 74 2e-13 ENSP00000261494 pep:known chromosome:NCBI36:17:20970850:21035428... 73 2e-13 ENSP00000296424 pep:known-ccds chromosome:NCBI36:4:104218232:104... 73 3e-13 ENSP00000220764 pep:known-ccds chromosome:NCBI36:8:91082756:9113... 73 4e-13 ENSP00000327975 pep:known chromosome:NCBI36:17:9615536:9635371:-... 72 8e-13 ENSP00000344674 pep:known chromosome:NCBI36:14:23177081:23184686... 69 4e-12 ENSP00000250383 pep:known-ccds chromosome:NCBI36:14:23177081:231... 69 4e-12 ENSP00000219481 pep:known-ccds chromosome:NCBI36:16:391827:40246... 67 1e-11 ENSP00000168216 pep:known-ccds chromosome:NCBI36:X:53474931:5347... 66 3e-11 ENSP00000288111 pep:known-ccds chromosome:NCBI36:14:23829649:238... 64 2e-10 ENSP00000296521 pep:known chromosome:NCBI36:4:175647958:17568021... 64 2e-10 ENSP00000353759 pep:known chromosome:NCBI36:14:59681255:59701900... 62 9e-10 ENSP00000216500 pep:known-ccds chromosome:NCBI36:14:59681255:597... 61 1e-09 ENSP00000262542 pep:known chromosome:NCBI36:9:114196641:11427450... 61 1e-09 ENSP00000334801 pep:known-ccds chromosome:NCBI36:14:23527959:235... 59 4e-09 ENSP00000171214 pep:known-ccds chromosome:NCBI36:19:9984925:9993... 59 6e-09 ENSP00000251312 pep:known chromosome:NCBI36:17:32022442:32031324... 59 7e-09 ENSP00000263278 pep:known-ccds chromosome:NCBI36:19:54008091:540... 58 1e-08 ENSP00000312939 pep:known-ccds chromosome:NCBI36:18:59148813:591... 58 1e-08 ENSP00000307607 pep:known-ccds chromosome:NCBI36:8:57375122:5739... 57 2e-08 ENSP00000303356 pep:known-ccds chromosome:NCBI36:17:77587046:775... 57 3e-08 ENSP00000372203 pep:known chromosome:NCBI36:14:23527959:23545444... 55 1e-07 ENSP00000368173 pep:known chromosome:NCBI36:17:24248928:24254215... 53 3e-07 ENSP00000364453 pep:known-ccds chromosome:NCBI36:X:53474931:5347... 52 5e-07 ENSP00000225929 pep:known-ccds chromosome:NCBI36:17:37954758:379... 47 2e-05 ENSP00000364412 pep:known-ccds chromosome:NCBI36:9:98037409:9810... 46 5e-05 >ENSP00000363794 pep:known-ccds chromosome:NCBI36:6:33280397:33282586:1 gene:ENSG00000204228 transcript:ENST00000374662 CCDS4769.1 Length = 261 Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 20/266 (7%) Query: 3 NLNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGGKA----- 57 L A+VTGA SGIG+ + ++ A + G K Sbjct: 8 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG 67 Query: 58 --IGVAMDVTNEDAVNAGVDKVAETFG-SVDILVSNAGIQIVNPIENYAFADWKKMQAIH 114 DV+ A +++V F ++VS AGI + + + DW K+ A++ Sbjct: 68 NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVN 127 Query: 115 VDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEG 174 + G FL T+AA + + + G +I + S+ + ++ Y +K G++GL + A+E Sbjct: 128 LKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAAREL 187 Query: 175 AKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVEDVAK 234 +H +R + V PGF+ TP+ K +P++ +++ + + +G D EDVA Sbjct: 188 GRHGIRCNSVLPGFIATPMTQK-VPQKVV------DKITEMIPMGHLGD-----PEDVAD 235 Query: 235 TVLFLSAFPSAALTGQSFVVSHGWFM 260 V FL++ S +TG S V+ G FM Sbjct: 236 VVAFLASEDSGYITGTSVEVTGGLFM 261 >ENSP00000230236 pep:known chromosome:NCBI36:c6_QBL:33244098:33246290:1 gene:ENSG00000112474 transcript:ENST00000230236 Length = 261 Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 20/266 (7%) Query: 3 NLNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGGKA----- 57 L A+VTGA SGIG+ + ++ A + G K Sbjct: 8 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG 67 Query: 58 --IGVAMDVTNEDAVNAGVDKVAETFG-SVDILVSNAGIQIVNPIENYAFADWKKMQAIH 114 DV+ A +++V F ++VS AGI + + + DW K+ A++ Sbjct: 68 NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVN 127 Query: 115 VDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEG 174 + G FL T+AA + + + G +I + S+ + ++ Y +K G++GL + A+E Sbjct: 128 LKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAAREL 187 Query: 175 AKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVEDVAK 234 +H +R + V PGF+ TP+ K +P++ +++ + + +G D EDVA Sbjct: 188 GRHGIRCNSVLPGFIATPMTQK-VPQKVV------DKITEMIPMGHLGD-----PEDVAD 235 Query: 235 TVLFLSAFPSAALTGQSFVVSHGWFM 260 V FL++ S +TG S V+ G FM Sbjct: 236 VVAFLASEDSGYITGTSVEVTGGLFM 261 >ENSP00000303525 pep:known-ccds chromosome:NCBI36:4:170145319:170167997:-1 gene:ENSG00000145439 transcript:ENST00000306193 CCDS3812.1 Length = 237 Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 73/252 (28%), Positives = 115/252 (45%), Gaps = 21/252 (8%) Query: 7 KTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGGKAIGVAMDVTN 66 K V G + GIG+ + N +GA A A + GG + + DV Sbjct: 3 KVCAVFGGSRGIGRAVAQLMARKGYRLAVIARNLEGAKAAAGDL---GGDHLAFSCDVAK 59 Query: 67 EDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFLTTKAAL 126 E V +++ + G V+ LV+ AGI + D ++ G+ LT KAA+ Sbjct: 60 EHDVQNTFEELEKHLGRVNFLVNAAGINRDGLLVRTKTEDMVSQLHTNLLGSMLTCKAAM 119 Query: 127 KHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCP 186 + M + +GG ++ +GS+ + + +S Y +K GL+G +R LAKE A+ +R +VV P Sbjct: 120 RTMIQQ-QGGSIVNVGSIVGLKGNSGQSVYSASKGGLVGFSRALAKEVARKKIRVNVVAP 178 Query: 187 GFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVEDVAKTVLFLSAFPSAA 246 GFV T + + EE + K + LG+ F +VA V+FL S Sbjct: 179 GFVHTDMTKD----------LKEEHLKKNIPLGR-----FGETIEVAHAVVFL--LESPY 221 Query: 247 LTGQSFVVSHGW 258 +TG VV G Sbjct: 222 ITGHVLVVDGGL 233 >ENSP00000353917 pep:novel chromosome:NCBI36:4:170145319:170167997:-1 gene:ENSG00000145439 transcript:ENST00000360695 Length = 237 Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 72/252 (28%), Positives = 114/252 (45%), Gaps = 21/252 (8%) Query: 7 KTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGGKAIGVAMDVTN 66 K V G + GIG+ + N +GA A A + GG + + DV Sbjct: 3 KVCAVFGGSRGIGRAVAQLMARKGYRLAVIARNLEGAKAAAGDL---GGDHLAFSCDVAK 59 Query: 67 EDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFLTTKAAL 126 E V +++ + G V+ LV+ AGI + D ++ G+ LT KAA+ Sbjct: 60 EHDVQNTFEELEKHLGRVNFLVNAAGINRDGLLVRTKTEDMVSQLHTNLLGSMLTCKAAM 119 Query: 127 KHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCP 186 + M + +GG ++ +G + + + +S Y +K GL+G +R LAKE A+ +R +VV P Sbjct: 120 RTMIQQ-QGGSIVNVGDIVGLKGNSGQSVYSASKGGLVGFSRALAKEVARKKIRVNVVAP 178 Query: 187 GFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVEDVAKTVLFLSAFPSAA 246 GFV T + + EE + K + LG+ F +VA V+FL S Sbjct: 179 GFVHTDMTKD----------LKEEHLKKNIPLGR-----FGETIEVAHAVVFL--LESPY 221 Query: 247 LTGQSFVVSHGW 258 +TG VV G Sbjct: 222 ITGHVLVVDGGL 233 >ENSP00000256216 pep:known-ccds chromosome:NCBI36:5:118816103:118905926:1 gene:ENSG00000133835 transcript:ENST00000256216 CCDS4126.1 Length = 736 Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 94/197 (47%), Gaps = 21/197 (10%) Query: 3 NLNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQD---------GANAVAEQIKQA 53 +G+ +VTGA +G+G+ D A+ V E+I++ Sbjct: 6 RFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRR 65 Query: 54 GGKAIGVAMDVTNEDAVNAGVDKVAET----FGSVDILVSNAGIQIVNPIENYAFADWKK 109 GGKA V N D+V G +KV +T FG +D++V+NAGI + DW Sbjct: 66 GGKA------VANYDSVEEG-EKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWDI 118 Query: 110 MQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARV 169 + +H+ G+F T+AA +HM K + G +I S + ++ Y AK GLLGLA Sbjct: 119 IHRVHLRGSFQVTRAAWEHM-KKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANS 177 Query: 170 LAKEGAKHNVRSHVVCP 186 LA EG K N+ + + P Sbjct: 178 LAIEGRKSNIHCNTIAP 194 >ENSP00000326219 pep:known-ccds chromosome:NCBI36:14:23492805:23508326:1 gene:ENSG00000157326 transcript:ENST00000313250 CCDS9605.1 Length = 278 Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 74/258 (28%), Positives = 109/258 (42%), Gaps = 18/258 (6%) Query: 4 LNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGGKAIGVAMD 63 L K A+VT + GIG I Q + ++ G G Sbjct: 30 LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCH 89 Query: 64 VTNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNP----IENYAFADWKKMQAIHVDGAF 119 V + V + G +DILVSNA VNP I + W K I+V Sbjct: 90 VGKAEDRERLVATAVKLHGGIDILVSNAA---VNPFFGSIMDVTEEVWDKTLDINVKAPA 146 Query: 120 LTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNV 179 L TKA + M K GG V+ + S+ + SP S Y +K LLGL + LA E A N+ Sbjct: 147 LMTKAVVPEMEKRG-GGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNI 205 Query: 180 RSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVEDVAKTVLFL 239 R + + PG ++T ++ KE + E +++ LG+ ED A V FL Sbjct: 206 RVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRR--LGEP--------EDCAGIVSFL 255 Query: 240 SAFPSAALTGQSFVVSHG 257 + ++ +TG++ VV G Sbjct: 256 CSEDASYITGETVVVGGG 273 >ENSP00000351035 pep:known-ccds chromosome:NCBI36:4:88476790:88531369:-1 gene:ENSG00000198189 transcript:ENST00000358290 CCDS3619.1 Length = 300 Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 6/220 (2%) Query: 3 NLNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGGKAIGVAM 62 ++ G+ ++TGA GIG+ N+ G A + K G K + Sbjct: 33 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVV 92 Query: 63 DVTNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFLTT 122 D +N + + + KV G V ILV+NAG+ + + +K ++V F TT Sbjct: 93 DCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTT 152 Query: 123 KAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHN---V 179 KA L M K++ G +V + S H + P AY ++K +G + L E A V Sbjct: 153 KAFLPAMTKNNHGHIVT-VASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGV 211 Query: 180 RSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLG 219 ++ +CP FV T + P + + EEVV ++M G Sbjct: 212 KTTCLCPNFVNTGFIKN--PSTSLGPTLEPEEVVNRLMHG 249 >ENSP00000296522 pep:known-ccds chromosome:NCBI36:4:175647958:175680213:-1 gene:ENSG00000164120 transcript:ENST00000296522 CCDS3821.1 Length = 266 Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 69/245 (28%), Positives = 111/245 (45%), Gaps = 25/245 (10%) Query: 4 LNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGA----NAVAEQIKQAGGKAIG 59 +NGK A+VTGAA GIG+ N + A+ EQ + K + Sbjct: 3 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALDEQFEPQ--KTLF 60 Query: 60 VAMDVTNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAF 119 + DV ++ + KV + FG +DILV+NAG VN +N W+K I++ Sbjct: 61 IQCDVADQQQLRDTFRKVVDHFGRLDILVNNAG---VNNEKN-----WEKTLQINLVSVI 112 Query: 120 LTTKAALKHMYKDD--RGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLAR--VLAKEGA 175 T L +M K + GG++I M S+ + Y +KHG++G R LA Sbjct: 113 SGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLM 172 Query: 176 KHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTV-------DGVFTT 228 VR + +CPGFV T +++ E+ I ++ +K ++ + +G+ T Sbjct: 173 NSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITL 232 Query: 229 VEDVA 233 +ED A Sbjct: 233 IEDDA 237 >ENSP00000373629 pep:known-ccds chromosome:NCBI36:2:216612243:216654709:-1 gene:ENSG00000115425 transcript:ENST00000388977 CCDS33375.1 Length = 303 Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 73/272 (26%), Positives = 116/272 (42%), Gaps = 37/272 (13%) Query: 2 GNLNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQI-------KQAG 54 G L G+ AIVTG A+GIGK I + + A+++ KQA Sbjct: 14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQA- 72 Query: 55 GKAIGVAMDVTNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFADWKKMQAIH 114 + I + ++ NE+ VN V +TFG ++ LV+N G Q ++P E+ + W + + Sbjct: 73 -RVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETN 131 Query: 115 VDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEG 174 + G F KA K+ G +V + V + PL A+ G+ L + LA E Sbjct: 132 LTGTFYMCKAVYSSWMKEHGGSIVNII--VPTKAGFPLAVHSGAARAGVYNLTKSLALEW 189 Query: 175 AKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQT-VDGVFTTV---- 229 A +R + V PG + S+ V GQ+ +G F + Sbjct: 190 ACSGIRINCVAPGVI-----------------YSQTAVENYGSWGQSFFEGSFQKIPAKR 232 Query: 230 ----EDVAKTVLFLSAFPSAALTGQSFVVSHG 257 E+V+ V FL + ++ +TGQS V G Sbjct: 233 IGVPEEVSSVVCFLLSPAASFITGQSVDVDGG 264 >ENSP00000373632 pep:known-ccds chromosome:NCBI36:2:216612243:216654709:-1 gene:ENSG00000115425 transcript:ENST00000388980 CCDS33375.1 Length = 303 Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 73/272 (26%), Positives = 116/272 (42%), Gaps = 37/272 (13%) Query: 2 GNLNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQI-------KQAG 54 G L G+ AIVTG A+GIGK I + + A+++ KQA Sbjct: 14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQA- 72 Query: 55 GKAIGVAMDVTNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFADWKKMQAIH 114 + I + ++ NE+ VN V +TFG ++ LV+N G Q ++P E+ + W + + Sbjct: 73 -RVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETN 131 Query: 115 VDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEG 174 + G F KA K+ G +V + V + PL A+ G+ L + LA E Sbjct: 132 LTGTFYMCKAVYSSWMKEHGGSIVNII--VPTKAGFPLAVHSGAARAGVYNLTKSLALEW 189 Query: 175 AKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQT-VDGVFTTV---- 229 A +R + V PG + S+ V GQ+ +G F + Sbjct: 190 ACSGIRINCVAPGVI-----------------YSQTAVENYGSWGQSFFEGSFQKIPAKR 232 Query: 230 ----EDVAKTVLFLSAFPSAALTGQSFVVSHG 257 E+V+ V FL + ++ +TGQS V G Sbjct: 233 IGVPEEVSSVVCFLLSPAASFITGQSVDVDGG 264 >ENSP00000333300 pep:known-ccds chromosome:NCBI36:4:88443965:88463062:-1 gene:ENSG00000170509 transcript:ENST00000328546 CCDS3618.1 Length = 300 Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 112/253 (44%), Gaps = 20/253 (7%) Query: 6 GKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGGKAIGVAMDVT 65 G+ ++TGA GIG++ N+ G A + ++ G A +D + Sbjct: 36 GEIVLITGAGHGIGRQTTYEFAKRQSILVLWDINKRGVEETAAECRKLGVTAHAYVVDCS 95 Query: 66 NEDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVD--GAFLTTK 123 N + + +++V + G V I+V+NAG V P + + D + + V+ G F TK Sbjct: 96 NREEIYRSLNQVKKEVGDVTIVVNNAG--TVYPADLLSTKDEEITKTFEVNILGHFWITK 153 Query: 124 AALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKE---GAKHNVR 180 A L M + + G +V + SV HE P Y ++K +G R L E K ++ Sbjct: 154 ALLPSMMERNHGHIVT-VASVCGHEGIPYLIPYCSSKFAAVGFHRGLTSELQALGKTGIK 212 Query: 181 SHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVEDVAKTVLFLS 240 + +CP FV T P + +EVV+ + +DG+ T K ++F+ Sbjct: 213 TSCLCPVFVNTGFTKN--PSTRLWPVLETDEVVRSL-----IDGILTN-----KKMIFVP 260 Query: 241 AFPSAALTGQSFV 253 ++ + L Q F+ Sbjct: 261 SYINIFLRLQKFL 273 >ENSP00000265322 pep:known chromosome:NCBI36:2:216611357:216654709:-1 gene:ENSG00000115425 transcript:ENST00000265322 Length = 302 Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 72/272 (26%), Positives = 118/272 (43%), Gaps = 38/272 (13%) Query: 2 GNLNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQI-------KQAG 54 G L G+ AIVTG A+GIGK I + + A+++ KQA Sbjct: 14 GLLQGQVAIVTGGATGIGKAIVKELLELGTNVVIASRKLERLKSAADELQANLPPTKQA- 72 Query: 55 GKAIGVAMDVTNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFADWKKMQAIH 114 + I + ++ NE+ VN V +TFG ++ LV+N G Q ++P E+ + W + + Sbjct: 73 -RVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETN 131 Query: 115 VDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEG 174 + G F KA + + + GG ++ + V + PL A+ G+ L + LA E Sbjct: 132 LTGTFYMCKAG--NSWMKEHGGSIVNI-IVPTKAGFPLAVHSGAARAGVYNLTKSLALEW 188 Query: 175 AKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQT-VDGVFTTV---- 229 A +R + V PG + S+ V GQ+ +G F + Sbjct: 189 ACSGIRINCVAPGVI-----------------YSQTAVENYGSWGQSFFEGSFQKIPAKR 231 Query: 230 ----EDVAKTVLFLSAFPSAALTGQSFVVSHG 257 E+V+ V FL + ++ +TGQS V G Sbjct: 232 IGVPEEVSSVVCFLLSPAASFITGQSVDVDGG 263 >ENSP00000372558 pep:novel chromosome:NCBI36:c6_COX:33241150:33242652:1 gene:ENSG00000206216 transcript:ENST00000383080 Length = 231 Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 9/207 (4%) Query: 3 NLNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGGKA----- 57 L A+VTGA SGIG+ + ++ A + G K Sbjct: 8 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG 67 Query: 58 --IGVAMDVTNEDAVNAGVDKVAETFG-SVDILVSNAGIQIVNPIENYAFADWKKMQAIH 114 DV+ A +++V F ++VS AGI + + + DW K+ A++ Sbjct: 68 NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVN 127 Query: 115 VDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEG 174 + G FL T+AA + + + G +I + S+ + ++ Y +K G++GL + A+E Sbjct: 128 LKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAAREL 187 Query: 175 AKHNVRSHVVCPGFVRTPLVDKQIPEQ 201 +H +R + V PGF+ TP+ K +P++ Sbjct: 188 GRHGIRCNSVLPGFIATPMTQK-VPQK 213 >ENSP00000320352 pep:known-ccds chromosome:NCBI36:17:20970850:21035428:1 gene:ENSG00000109016 transcript:ENST00000346603 CCDS11215.1 Length = 325 Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 100/253 (39%), Gaps = 13/253 (5%) Query: 4 LNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGG-------- 55 L ++TGA SG+GKE N A+ E I++ Sbjct: 50 LRNAVVVITGATSGLGKECAKVFYAAGAKLVLCGRN---GGALEELIRELTASHATKVQT 106 Query: 56 -KAIGVAMDVTNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFADWKKMQAIH 114 K V D+T+ A+ A ++ + FG VDILV+NAGI I + K++ + Sbjct: 107 HKPYLVTFDLTDSGAIVAAAAEILQCFGYVDILVNNAGISYRGTIMDTTVDVDKRVMETN 166 Query: 115 VDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEG 174 G TKA L M K R G ++ + S+ + P +SAY +KH L E Sbjct: 167 YFGPVALTKALLPSMIK-RRQGHIVAISSIQGKMSIPFRSAYAASKHATQAFFDCLRAEM 225 Query: 175 AKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVEDVAK 234 ++ + V+ PG++ T L I G+ + + + V V K Sbjct: 226 EQYEIEVTVISPGYIHTNLSVNAITADGSRYGVMDTTTAQGRSPVEVAQDVLAAVGKKKK 285 Query: 235 TVLFLSAFPSAAL 247 V+ PS A+ Sbjct: 286 DVILADLLPSLAV 298 >ENSP00000261494 pep:known chromosome:NCBI36:17:20970850:21035428:1 gene:ENSG00000109016 transcript:ENST00000261494 Length = 285 Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 13/223 (5%) Query: 4 LNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGG-------- 55 L ++TGA SG+GKE N A+ E I++ Sbjct: 50 LRNAVVVITGATSGLGKECAKVFYAAGAKLVLCGRN---GGALEELIRELTASHATKVQT 106 Query: 56 -KAIGVAMDVTNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFADWKKMQAIH 114 K V D+T+ A+ A ++ + FG VDILV+NAGI I + K++ + Sbjct: 107 HKPYLVTFDLTDSGAIVAAAAEILQCFGYVDILVNNAGISYRGTIMDTTVDVDKRVMETN 166 Query: 115 VDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEG 174 G TKA L M K R G ++ + S+ + P +SAY +KH L E Sbjct: 167 YFGPVALTKALLPSMIK-RRQGHIVAISSIQGKMSIPFRSAYAASKHATQAFFDCLRAEM 225 Query: 175 AKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVM 217 ++ + V+ PG++ T L I G+ + ++ + Sbjct: 226 EQYEIEVTVISPGYIHTNLSVNAITADGSRYGVMDTTTAQEAL 268 >ENSP00000296424 pep:known-ccds chromosome:NCBI36:4:104218232:104240473:-1 gene:ENSG00000164039 transcript:ENST00000296424 CCDS3663.1 Length = 245 Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 19/227 (8%) Query: 40 QDGANAVAEQIKQAGGKAI----GV---AMDVTNEDAVNAGVDKVAETFGSVDILVSNAG 92 ++GA +A I ++ + + G+ +DVT + + D+ A +D+L + AG Sbjct: 28 REGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQI----DQFANEVERLDVLFNVAG 83 Query: 93 IQIVNPIENYAFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPL 152 + + DW ++V +L KA L M + G +I M SV S + Sbjct: 84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSVASSVKGVV 142 Query: 153 -KSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEE 211 + Y T K ++GL + +A + + +R + VCPG V TP + ++I QA+ G EE Sbjct: 143 NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERI--QAR--GNPEE- 197 Query: 212 VVKKVMLGQTVDGVFTTVEDVAKTVLFLSAFPSAALTGQSFVVSHGW 258 + L + G F T E++A ++L++ SA +TG ++ GW Sbjct: 198 -ARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGW 243 >ENSP00000220764 pep:known-ccds chromosome:NCBI36:8:91082756:91133403:1 gene:ENSG00000104325 transcript:ENST00000220764 CCDS6250.1 Length = 335 Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 10/202 (4%) Query: 41 DGANAVAEQIK-QAGGKAIGVAMDVTNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNPI 99 D A AEQI Q G K + DV + D V V ++ + G +I+++NA ++P Sbjct: 94 DVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPT 153 Query: 100 ENYAFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTA 159 E + WK + I ++G T K + K +G + + ++++ S +A Sbjct: 154 ERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASA 213 Query: 160 KHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLG 219 K G+ +++ LA E K+ +R +V+ PG P+ K + G E+E M+G Sbjct: 214 KAGVEAMSKSLAAEWGKYGMRFNVIQPG----PIKTKGAFSRLDPTGTFEKE-----MIG 264 Query: 220 QTVDGVFTTVEDVAKTVLFLSA 241 + G TVE++A FL + Sbjct: 265 RIPCGRLGTVEELANLAAFLCS 286 >ENSP00000327975 pep:known chromosome:NCBI36:17:9615536:9635371:-1 gene:ENSG00000184544 transcript:ENST00000330255 Length = 326 Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 109/260 (41%), Gaps = 16/260 (6%) Query: 4 LNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXN-------QDGANAVAEQIKQAGGK 56 + K ++T A SG+GKE N D +VA+ KQ Sbjct: 50 VQNKVVVITDAISGLGKECARVFHTGGARLVLCGKNWERLENLYDALISVADPSKQTFTP 109 Query: 57 AIGVAMDVTNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVD 116 + V +D+++ V +V + +G VDIL++NA +++ P + KK+ + Sbjct: 110 KL-VLLDLSDISCVPDVAKEVLDCYGCVDILINNASVKVKGPAHKISLELDKKIMDANYF 168 Query: 117 GAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAK 176 G TKA L +M R G ++ + ++ P ++ Y +KH LG L E + Sbjct: 169 GPITLTKALLPNMI-SRRTGQIVLVNNIQGKFGIPFRTTYAASKHAALGFFDCLRAEVEE 227 Query: 177 HNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLG----QTVDGVFTTVEDV 232 ++V V P F+R+ V PEQ + +K+ G + + V TV Sbjct: 228 YDVVISTVSPTFIRSYHV---YPEQGNWEASIWKFFFRKLTYGVHPVEVAEEVMRTVRRK 284 Query: 233 AKTVLFLSAFPSAALTGQSF 252 + V + P AA+ ++F Sbjct: 285 KQEVFMANPIPKAAVYVRTF 304 >ENSP00000344674 pep:known chromosome:NCBI36:14:23177081:23184686:1 gene:ENSG00000100867 transcript:ENST00000344777 Length = 303 Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 83/194 (42%), Gaps = 9/194 (4%) Query: 2 GNLNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGGKAIGVA 61 G L + A+VTG+ SGIG I Q + +++ G G+ Sbjct: 32 GVLANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGEGLSVAGIV 91 Query: 62 MDVTNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFAD----WKKMQAIHVDG 117 V + V K E G VD LV +AG VNP+ W K+ +++V Sbjct: 92 CHVGKAEDREQLVAKALEHCGGVDFLVCSAG---VNPLVGSTLGTSEQIWDKILSVNVKS 148 Query: 118 AFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKH 177 L L +M ++R G VI + S+ ++ Y +K LLGL R LA E A Sbjct: 149 PALLLSQLLPYM--ENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALELAPK 206 Query: 178 NVRSHVVCPGFVRT 191 ++R + V PG ++T Sbjct: 207 DIRVNCVVPGIIKT 220 >ENSP00000250383 pep:known-ccds chromosome:NCBI36:14:23177081:23184686:1 gene:ENSG00000100867 transcript:ENST00000250383 CCDS9604.1 Length = 280 Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 83/194 (42%), Gaps = 9/194 (4%) Query: 2 GNLNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGGKAIGVA 61 G L + A+VTG+ SGIG I Q + +++ G G+ Sbjct: 32 GVLANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGEGLSVAGIV 91 Query: 62 MDVTNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFAD----WKKMQAIHVDG 117 V + V K E G VD LV +AG VNP+ W K+ +++V Sbjct: 92 CHVGKAEDREQLVAKALEHCGGVDFLVCSAG---VNPLVGSTLGTSEQIWDKILSVNVKS 148 Query: 118 AFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKH 177 L L +M ++R G VI + S+ ++ Y +K LLGL R LA E A Sbjct: 149 PALLLSQLLPYM--ENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALELAPK 206 Query: 178 NVRSHVVCPGFVRT 191 ++R + V PG ++T Sbjct: 207 DIRVNCVVPGIIKT 220 >ENSP00000219481 pep:known-ccds chromosome:NCBI36:16:391827:402463:1 gene:ENSG00000103202 transcript:ENST00000219481 CCDS10409.1 Length = 292 Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 12/258 (4%) Query: 4 LNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGGK-AIGVAM 62 L K A +TG SGIG I + A ++ A G+ + ++M Sbjct: 26 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 85 Query: 63 DVTNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFLTT 122 DV AV A VD+ + FG +DIL++ A + P +F +K + I G F + Sbjct: 86 DVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVS 145 Query: 123 KAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSH 182 + + ++ D GGV++ + + + L+ +AK + + R LA E N+R + Sbjct: 146 RVLYEKFFR-DHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVN 204 Query: 183 VVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVEDVAKTVLFLSAF 242 + PG P+ E + LG + + KV ++A +VL+L++ Sbjct: 205 SLAPG----PISGT---EGLRRLGGPQASLSTKVTASPLQR--LGNKTEIAHSVLYLASP 255 Query: 243 PSAALTGQSFVVSHG-WF 259 ++ +TG V G W Sbjct: 256 LASYVTGAVLVADGGAWL 273 >ENSP00000168216 pep:known-ccds chromosome:NCBI36:X:53474931:53478045:-1 gene:ENSG00000072506 transcript:ENST00000168216 CCDS14354.1 Length = 261 Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 15/210 (7%) Query: 3 NLNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGGKAIGVAM 62 ++ G A++TG ASG+G G A Q K+ G + Sbjct: 7 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEA---QAKKLGNNCVFAPA 63 Query: 63 DVTNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIEN------YAFADWKKMQAIHVD 116 DVT+E V + FG VD+ V+ AGI + + N + D++++ +++ Sbjct: 64 DVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLM 123 Query: 117 GAFLTTKAALKHMYKD--DRGG---VVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLA 171 G F + M ++ D+GG V+I SV + E ++AY +K G++G+ +A Sbjct: 124 GTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 183 Query: 172 KEGAKHNVRSHVVCPGFVRTPLVDKQIPEQ 201 ++ A +R + PG TPL+ +PE+ Sbjct: 184 RDLAPIGIRVMTIAPGLFGTPLL-TSLPEK 212 >ENSP00000288111 pep:known-ccds chromosome:NCBI36:14:23829649:23838815:-1 gene:ENSG00000157379 transcript:ENST00000288111 CCDS9623.1 Length = 313 Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 28/261 (10%) Query: 4 LNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGGKAIGVAMD 63 +NG+ +VTGA+ GIG+ I + D VA++ + GG+ + V D Sbjct: 5 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCD 64 Query: 64 VTNEDAVNAGVDKV-AETFGSVDILVSN--AGIQIVNPIENYAFAD-----WKKMQAIHV 115 + E V + ++V E G +D+LV+N AG+Q + N AF + W + + + Sbjct: 65 SSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGL 124 Query: 116 DGAFLTTKAALKHMYKDDRGGVVIYM--GSVHSHEASPLKSAYVTAKHGLLGLARVLAKE 173 G + + + M +G +V+ GS+ P Y K LA A E Sbjct: 125 RGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVP----YGVGKAACDKLAADCAHE 180 Query: 174 GAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVEDV- 232 +H V + PG V+T L+ + +++EEV++ +L Q F++ E Sbjct: 181 LRRHGVSCVSLWPGIVQTELLKEH---------MAKEEVLQDPVLKQ-FKSAFSSAETTE 230 Query: 233 --AKTVLFLSAFPS-AALTGQ 250 K V+ L+ P+ +L+G+ Sbjct: 231 LSGKCVVALATDPNILSLSGK 251 >ENSP00000296521 pep:known chromosome:NCBI36:4:175647958:175680213:-1 gene:ENSG00000164120 transcript:ENST00000296521 Length = 178 Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 16/172 (9%) Query: 3 NLNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGA----NAVAEQIKQAGGKAI 58 ++NGK A+VTGAA GIG+ N + A+ EQ + K + Sbjct: 2 HVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALDEQFEPQ--KTL 59 Query: 59 GVAMDVTNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGA 118 + DV ++ + KV + FG +DILV+NAG VN +N W+K I++ Sbjct: 60 FIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAG---VNNEKN-----WEKTLQINLVSV 111 Query: 119 FLTTKAALKHMYKDD--RGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLAR 168 T L +M K + GG++I M S+ + Y +KHG++G R Sbjct: 112 ISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTR 163 >ENSP00000353759 pep:known chromosome:NCBI36:14:59681255:59701900:-1 gene:ENSG00000100612 transcript:ENST00000360557 Length = 375 Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 7/202 (3%) Query: 11 VTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGG----KAIGVAMDVTN 66 VTGA+SGIG+E+ V + + G + + +D+T+ Sbjct: 55 VTGASSGIGEELAYQLSKLGVSLVLSARRVHELERVKRRCLENGNLKEKDILVLPLDLTD 114 Query: 67 EDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFLTTKAAL 126 + A V + FG +DILV+N G+ + + + ++K+ ++ G TK L Sbjct: 115 TGSHEAATKAVLQEFGRIDILVNNGGMSQRSLCMDTSLDVYRKLIELNYLGTVSLTKCVL 174 Query: 127 KHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKH-NVRSHVVC 185 HM + +G +V + S+ + PL Y +KH L G L E A + + +C Sbjct: 175 PHMIERKQGKIVT-VNSILGIISVPLSIGYCASKHALRGFFNGLRTELATYPGIIVSNIC 233 Query: 186 PGFVRTPLVDKQIP-EQAKELG 206 PG V++ +V+ + E K +G Sbjct: 234 PGPVQSNIVENSLAGEVTKTIG 255 >ENSP00000216500 pep:known-ccds chromosome:NCBI36:14:59681255:59701900:-1 gene:ENSG00000100612 transcript:ENST00000216500 CCDS9743.1 Length = 339 Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 7/202 (3%) Query: 11 VTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGG----KAIGVAMDVTN 66 VTGA+SGIG+E+ V + + G + + +D+T+ Sbjct: 55 VTGASSGIGEELAYQLSKLGVSLVLSARRVHELERVKRRCLENGNLKEKDILVLPLDLTD 114 Query: 67 EDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFLTTKAAL 126 + A V + FG +DILV+N G+ + + + ++K+ ++ G TK L Sbjct: 115 TGSHEAATKAVLQEFGRIDILVNNGGMSQRSLCMDTSLDVYRKLIELNYLGTVSLTKCVL 174 Query: 127 KHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKH-NVRSHVVC 185 HM + +G +V + S+ + PL Y +KH L G L E A + + +C Sbjct: 175 PHMIERKQGKIVT-VNSILGIISVPLSIGYCASKHALRGFFNGLRTELATYPGIIVSNIC 233 Query: 186 PGFVRTPLVDKQIP-EQAKELG 206 PG V++ +V+ + E K +G Sbjct: 234 PGPVQSNIVENSLAGEVTKTIG 255 >ENSP00000262542 pep:known chromosome:NCBI36:9:114196641:114274505:1 gene:ENSG00000119471 transcript:ENST00000262542 Length = 417 Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 54/201 (26%) Query: 1 MGNLNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAV-------------- 46 + L G T +TGA+ GIGK I +DGAN V Sbjct: 4 LKRLAGCTVFITGASRGIGKAIALKAA------------KDGANIVIAAKTAQPHPKLLG 51 Query: 47 -----AEQIKQAGGKAIGVAMDVTNEDAVNAGVDKVAETFGSVDILVSNA-GIQIVNPIE 100 AE+I+ GGKA+ +DV +E ++A V+K + FG +DILV+NA I + N ++ Sbjct: 52 TIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLD 111 Query: 101 NYAFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLK------- 153 M ++ G +L +KA + ++ K ++ + + PL Sbjct: 112 TPT-KRLDLMMNVNTRGTYLASKACIPYLKKSKVAHIL--------NISPPLNLNPVWFK 162 Query: 154 --SAYVTAKHGL----LGLAR 168 AY AK+G+ LG+A Sbjct: 163 QHCAYTIAKYGMSMYVLGMAE 183 >ENSP00000334801 pep:known-ccds chromosome:NCBI36:14:23527959:23545444:1 gene:ENSG00000187630 transcript:ENST00000335125 CCDS9606.1 Length = 230 Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 78/202 (38%), Gaps = 19/202 (9%) Query: 4 LNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGGKAIGVAMD 63 L K A+VT + GIG I Q + ++ G G Sbjct: 28 LTNKVALVTASTDGIGFAIARRLAQDRAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCH 87 Query: 64 VTNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNP----IENYAFADWKKMQAIHVDGAF 119 V + V + G +DILVSNA VNP + + W K I+V Sbjct: 88 VGKAEDRERLVAMAVKLHGGIDILVSNAA---VNPFFGSLMDVTEEVWDKTLDINVKAPA 144 Query: 120 LTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNV 179 L TKA + M K GG V+ + S+ + SP S Y +K LLGL LA E A N+ Sbjct: 145 LMTKAVVPEMEKRG-GGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLNNTLAIELAPRNI 203 Query: 180 RSHVV-----------CPGFVR 190 R + + C G+ R Sbjct: 204 RVNCLHLDLSRLASAGCSGWTR 225 >ENSP00000171214 pep:known-ccds chromosome:NCBI36:19:9984925:9993954:1 gene:ENSG00000080511 transcript:ENST00000171214 CCDS12223.1 Length = 311 Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 8/189 (4%) Query: 7 KTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGGKAIGVAMDVTN 66 +T +++G +SGIG E+ E ++ A G+A+G + V Sbjct: 6 RTVLISGCSSGIGLELAVQLAHDPKKRYQVVATMRDLGK-KETLEAAAGEALGQTLTVAQ 64 Query: 67 EDAVNAGVDKVAETF----GSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFLTT 122 D + + VA+ G VD+LV+NAG+ +V P+E + A + + + GA Sbjct: 65 LDVCSD--ESVAQCLSCIQGEVDVLVNNAGMGLVGPLEGLSLAAMQNVFDTNFFGAVRLV 122 Query: 123 KAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSH 182 KA L M K R G ++ + SV + Y +K L G LA + + N+ Sbjct: 123 KAVLPGM-KRRRQGHIVVISSVMGLQGVIFNDVYAASKFALEGFFESLAIQLLQFNIFIS 181 Query: 183 VVCPGFVRT 191 +V PG V T Sbjct: 182 LVEPGPVVT 190 >ENSP00000251312 pep:known chromosome:NCBI36:17:32022442:32031324:1 gene:ENSG00000108272 transcript:ENST00000251312 Length = 260 Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 23/253 (9%) Query: 1 MGNLNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAG--GKAI 58 M + A+VTGA+ GIG + +A + K AG G I Sbjct: 6 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLI 65 Query: 59 GVAMDVTNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGA 118 D++NE+ + + + VDI ++NAG+ + + + + + WK M ++V Sbjct: 66 PYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLAL 125 Query: 119 FLTTKAALKHMYK---DDRGGVVIYMGSVHSHEASPLKSA--YVTAKHGLLGLARVLAKE 173 + T+ A + M + DD G +I + S+ H PL Y K+ + L L +E Sbjct: 126 SICTREAYQSMKERNVDD--GHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQE 183 Query: 174 --GAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVED 231 A+ ++R+ + PG V T K + ++ E + E +K + ED Sbjct: 184 LREAQTHIRATCISPGVVETQFAFK-LHDKDPEKAAATYEQMKCL-----------KPED 231 Query: 232 VAKTVLFLSAFPS 244 VA+ V+++ + P+ Sbjct: 232 VAEAVIYVLSTPA 244 >ENSP00000263278 pep:known-ccds chromosome:NCBI36:19:54008091:54031746:-1 gene:ENSG00000087076 transcript:ENST00000263278 CCDS12736.1 Length = 270 Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 25/213 (11%) Query: 42 GANAVAEQIKQAGGKAIG--------VAMDVTNEDAVNAGVDKVAETFGSVDILVSNAG- 92 GA V ++GG+A+ + DVT ED V V + FG +D +V+NAG Sbjct: 33 GARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGH 92 Query: 93 -IQIVNPIENYAFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVV---IYMGSVHSHE 148 P E A ++++ +++ G + TK AL ++ K +G V+ +G++ + Sbjct: 93 HPPPQRPEETSA-QGFRQLLELNLLGTYTLTKLALPYLRK-SQGNVINISSLVGAIGQAQ 150 Query: 149 ASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGIS 208 A P YV K + + + LA + + + VR + + PG + TPL E+ L Sbjct: 151 AVP----YVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLW-----EELAALMPD 201 Query: 209 EEEVVKKVMLGQTVDGVFTTVEDVAKTVLFLSA 241 +++ ML Q + G +V +FL++ Sbjct: 202 PRATIREGMLAQPL-GRMGQPAEVGAAAVFLAS 233 >ENSP00000312939 pep:known-ccds chromosome:NCBI36:18:59148813:59185438:-1 gene:ENSG00000119537 transcript:ENST00000326575 CCDS11982.1 Length = 332 Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 6/194 (3%) Query: 4 LNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGGK----AIG 59 L G +VTG +SGIGK I N+D ++I+ + Sbjct: 30 LPGAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNEDKLLQAKKEIEMHSINDKQVVLC 89 Query: 60 VAMDVTNE-DAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGA 118 +++DV+ + + V + + E G VD+LV+ AG+ + E+ + ++++ +I+ G+ Sbjct: 90 ISVDVSQDYNQVENVIKQAQEKLGPVDMLVNCAGMAVSGKFEDLEVSTFERLMSINYLGS 149 Query: 119 FLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHN 178 ++A + M K+ R G ++++ S +AY +K + GLA L E +N Sbjct: 150 VYPSRAVITTM-KERRVGRIVFVSSQAGQLGLFGFTAYSASKFAIRGLAEALQMEVKPYN 208 Query: 179 VRSHVVCPGFVRTP 192 V V P TP Sbjct: 209 VYITVAYPPDTDTP 222 >ENSP00000307607 pep:known-ccds chromosome:NCBI36:8:57375122:57395795:-1 gene:ENSG00000170786 transcript:ENST00000303749 CCDS6167.1 Length = 309 Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/245 (21%), Positives = 104/245 (42%), Gaps = 6/245 (2%) Query: 3 NLNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGGKAI-GVA 61 N+ G+ ++TGA SG+G+ + N++G + ++AG + Sbjct: 37 NVAGEIVLITGAGSGLGRLLALQFARLGSVLVLWDINKEGNEETCKMAREAGATRVHAYT 96 Query: 62 MDVTNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFLT 121 D + ++ V D+V + G V IL++NAGI + +K ++ T Sbjct: 97 CDCSQKEGVYRVADQVKKEVGDVSILINNAGIVTGKKFLDCPDELMEKSFDVNFKAHLWT 156 Query: 122 TKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEG---AKHN 178 KA L M +D G +V S + L + Y +K G A + E + Sbjct: 157 YKAFLPAMIANDHGHLVCISSSAGLSGVNGL-ADYCASKFAAFGFAESVFVETFVQKQKG 215 Query: 179 VRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEV-VKKVMLGQTVDGVFTTVEDVAKTVL 237 +++ +VCP F++T + + L I E + V+K++ + ++ + + ++ Sbjct: 216 IKTTIVCPFFIKTGMFEGCTTGCPSLLPILEPKYAVEKIVEAILQEKMYLYMPKLLYFMM 275 Query: 238 FLSAF 242 FL +F Sbjct: 276 FLKSF 280 >ENSP00000303356 pep:known-ccds chromosome:NCBI36:17:77587046:77588862:-1 gene:ENSG00000169738 transcript:ENST00000306869 CCDS11799.1 Length = 244 Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 18/256 (7%) Query: 4 LNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGGKAIGVAMD 63 L G+ +VTGA GIG+ Q +++ +++ G V +D Sbjct: 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSL---VRECPGIE-PVCVD 60 Query: 64 VTNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFLTTK 123 + + +A + V G VD+LV+NA + ++ P + + +++ ++ Sbjct: 61 LGDWEATERALGSV----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQ 116 Query: 124 AALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHV 183 + + G ++ + S S A S Y + K L L +V+A E H +R + Sbjct: 117 IVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNA 176 Query: 184 VCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVEDVAKTVLFLSAFP 243 V P V T + + K K ML + G F VE V +LFL + Sbjct: 177 VNPTVVMTSMGQATWSDPHK----------AKTMLNRIPLGKFAEVEHVVNAILFLLSDR 226 Query: 244 SAALTGQSFVVSHGWF 259 S TG + V G++ Sbjct: 227 SGMTTGSTLPVEGGFW 242 >ENSP00000372203 pep:known chromosome:NCBI36:14:23527959:23545444:1 gene:ENSG00000187630 transcript:ENST00000382755 Length = 158 Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 53/107 (49%), Gaps = 8/107 (7%) Query: 82 GSVDILVSNAGIQIVNP----IENYAFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGV 137 G +DILVSNA VNP + + W K I+V L TKA + M K GG Sbjct: 7 GGIDILVSNAA---VNPFFGSLMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRG-GGS 62 Query: 138 VIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVV 184 V+ + S+ + SP S Y +K LLGL LA E A N+R + + Sbjct: 63 VVIVSSIAAFSPSPGFSPYNVSKTALLGLNNTLAIELAPRNIRVNCL 109 >ENSP00000368173 pep:known chromosome:NCBI36:17:24248928:24254215:-1 gene:ENSG00000167536 transcript:ENST00000378895 Length = 377 Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 1 MGNLNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGG--KAI 58 MGNL G+TA+VTGA SGIGK +Q+ A A ++Q G + I Sbjct: 31 MGNLRGRTAVVTGANSGIGKMTALELARRGARVVLACRSQERGEAAAFDLRQESGNNEVI 90 Query: 59 GVAMDVTNEDAVNAGVDKVAETFGSVDILVSNAGI 93 +A+D+ + +V A + +DIL+ NAGI Sbjct: 91 FMALDLASLASVRAFATAFLSSEPRLDILIHNAGI 125 >ENSP00000364453 pep:known-ccds chromosome:NCBI36:X:53474931:53478028:-1 gene:ENSG00000072506 transcript:ENST00000375304 CCDS35300.1 Length = 252 Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 24/210 (11%) Query: 3 NLNGKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGGKAIGVAM 62 ++ G A++TG ASG+G G A Q K+ G + Sbjct: 7 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEA---QAKKLGNNCVFAPA 63 Query: 63 DVTNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIEN------YAFADWKKMQAIHVD 116 DVT+E V + FG VD+ V+ AGI + + N + D++++ +++ Sbjct: 64 DVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLM 123 Query: 117 GAFLTTKAALKHMYKD--DRG---GVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLA 171 G F + M ++ D+G GV+I SV + E ++AY +K G++G+ +A Sbjct: 124 GTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 183 Query: 172 KEGAKHNVRSHVVCPGFVRTPLVDKQIPEQ 201 ++ A G TPL+ +PE+ Sbjct: 184 RDLAPI---------GLFGTPLL-TSLPEK 203 >ENSP00000225929 pep:known-ccds chromosome:NCBI36:17:37954758:37960750:1 gene:ENSG00000108786 transcript:ENST00000225929 CCDS11428.1 Length = 328 Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 81/201 (40%), Gaps = 13/201 (6%) Query: 10 IVTGAASGIGKEIXXXXXXXXX------XXXXXXXNQDGANAVAEQIKQAGGKAIGVAMD 63 ++TG +SGIG + Q A + G + +D Sbjct: 7 LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLD 66 Query: 64 VTNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFLTTK 123 V + +V A ++V E G VD+LV NAG+ ++ P+E + ++V G + Sbjct: 67 VRDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQ 124 Query: 124 AALKHMYKDDRG-GVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSH 182 A L M + RG G V+ GSV P Y +K L GL LA V Sbjct: 125 AFLPDMKR--RGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLS 182 Query: 183 VVCPGFVRTPLVDKQI--PEQ 201 ++ G V T ++K + PE+ Sbjct: 183 LIECGPVHTAFMEKVLGSPEE 203 >ENSP00000364412 pep:known-ccds chromosome:NCBI36:9:98037409:98104255:-1 gene:ENSG00000130948 transcript:ENST00000375263 CCDS6716.1 Length = 310 Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 58/253 (22%), Positives = 111/253 (43%), Gaps = 15/253 (5%) Query: 6 GKTAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAEQIKQAGGKAIGVAM-DV 64 G+ A++TGA GIGK + A+A +I++ G+++ + D Sbjct: 48 GQWAVITGAGDGIGKAYSFELAKRGLNVVLISRTLEKLEAIATEIERTTGRSVKIIQADF 107 Query: 65 TNEDAVNAGVDKVAETFGSVDILVSNAGIQIVNPIENYAFADWKKMQAI---HVDGAFLT 121 T +D +K+A + ILV+N G+ + N + ++ ++Q++ ++ Sbjct: 108 TKDDIYEHIKEKLAGL--EIGILVNNVGM-LPNLLPSHFLNAPDEIQSLIHCNITSVVKM 164 Query: 122 TKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRS 181 T+ LKHM + + G+++ + S + PL S Y +K + ++ L +E V Sbjct: 165 TQLILKHM-ESRQKGLILNISSGIALFPWPLYSMYSASKAFVCAFSKALQEEYKAKEVII 223 Query: 182 HVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVEDVAKTVL--FL 239 V+ P V T + + + +E VK+ + T+ G T +A +L FL Sbjct: 224 QVLTPYAVSTAMTKYL---NTNVITKTADEFVKESLNYVTIGG--ETCGCLAHEILAGFL 278 Query: 240 SAFPSAALTGQSF 252 S P+ A +F Sbjct: 279 SLIPAWAFYSGAF 291 BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0020[271848] (348 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0021[271848] (220 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0022[271848] (250 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0023[271848] (275 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0024[271848] (235 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0025[271848] (278 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BTH_II0026[271848] (468 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ENSP00000346887 pep:known-ccds chromosome:NCBI36:7:99263572:9930... 75 1e-13 ENSP00000222982 pep:known-ccds chromosome:NCBI36:7:99083759:9911... 75 1e-13 ENSP00000368975 pep:known chromosome:NCBI36:7:99263602:99301564:... 74 4e-13 ENSP00000222382 pep:known-ccds chromosome:NCBI36:7:99263572:9930... 72 9e-13 ENSP00000346607 pep:known chromosome:NCBI36:7:99083437:99219700:... 72 1e-12 ENSP00000274118 pep:known chromosome:NCBI36:4:187349972:18737160... 72 1e-12 ENSP00000337915 pep:known-ccds chromosome:NCBI36:7:99192540:9921... 72 1e-12 ENSP00000368079 pep:known-ccds chromosome:NCBI36:4:187349972:187... 72 2e-12 ENSP00000345351 pep:known chromosome:NCBI36:7:99283200:99301560:... 70 4e-12 ENSP00000003100 pep:known-ccds chromosome:NCBI36:7:91579420:9160... 69 2e-11 ENSP00000292414 pep:known chromosome:NCBI36:7:99131301:99170652:... 68 3e-11 ENSP00000337450 pep:known-ccds chromosome:NCBI36:7:99140596:9917... 67 3e-11 ENSP00000261835 pep:known-ccds chromosome:NCBI36:14:99220407:992... 67 5e-11 ENSP00000338087 pep:known-ccds chromosome:NCBI36:7:139124668:139... 67 5e-11 ENSP00000228606 pep:known-ccds chromosome:NCBI36:12:56442385:564... 66 9e-11 ENSP00000360968 pep:known-ccds chromosome:NCBI36:1:47261827:4728... 63 6e-10 ENSP00000271153 pep:known-ccds chromosome:NCBI36:1:47037329:4705... 63 7e-10 ENSP00000360991 pep:known chromosome:NCBI36:1:47037305:47057608:... 63 7e-10 ENSP00000360987 pep:known chromosome:NCBI36:1:47037305:47057364:... 63 7e-10 ENSP00000342007 pep:known-ccds chromosome:NCBI36:15:72828237:728... 63 7e-10 ENSP00000258415 pep:known-ccds chromosome:NCBI36:2:219354745:219... 63 8e-10 ENSP00000374478 pep:novel chromosome:NCBI36:1:47262077:47288430:... 62 2e-09 ENSP00000001146 pep:known-ccds chromosome:NCBI36:2:72209875:7222... 60 4e-09 ENSP00000285949 pep:known-ccds chromosome:NCBI36:10:94811011:948... 59 8e-09 ENSP00000275016 pep:known-ccds chromosome:NCBI36:6:46625405:4672... 59 2e-08 ENSP00000269703 pep:known-ccds chromosome:NCBI36:19:15497144:155... 56 1e-07 ENSP00000334128 pep:known-ccds chromosome:NCBI36:2:127660462:127... 55 1e-07 ENSP00000312110 pep:known-ccds chromosome:NCBI36:7:99263572:9930... 55 2e-07 ENSP00000373995 pep:known-ccds chromosome:NCBI36:15:72417366:724... 55 2e-07 ENSP00000373994 pep:known-ccds chromosome:NCBI36:15:72417366:724... 55 2e-07 ENSP00000321821 pep:known chromosome:NCBI36:19:15645340:15668895... 54 3e-07 ENSP00000260433 pep:known-ccds chromosome:NCBI36:15:49288964:494... 54 3e-07 ENSP00000334246 pep:known-ccds chromosome:NCBI36:1:47305634:4735... 54 3e-07 ENSP00000216862 pep:known-ccds chromosome:NCBI36:20:52203395:522... 53 6e-07 ENSP00000221700 pep:known-ccds chromosome:NCBI36:19:15849834:158... 52 1e-06 ENSP00000325822 pep:known-ccds chromosome:NCBI36:8:143988983:143... 52 2e-06 ENSP00000011989 pep:known-ccds chromosome:NCBI36:19:15613196:156... 51 3e-06 ENSP00000314398 pep:known chromosome:NCBI36:19:15587421:15601445... 50 7e-06 ENSP00000292427 pep:known-ccds chromosome:NCBI36:8:143950780:143... 50 7e-06 ENSP00000358903 pep:known-ccds chromosome:NCBI36:10:104580278:10... 49 1e-05 ENSP00000366903 pep:known chromosome:NCBI36:8:143952243:14395823... 49 1e-05 ENSP00000364305 pep:known chromosome:NCBI36:6:32114072:32117426:... 49 1e-05 ENSP00000372811 pep:known chromosome:NCBI36:c6_QBL:32106592:3210... 49 1e-05 ENSP00000304955 pep:known chromosome:NCBI36:c6_COX:32101901:3210... 49 1e-05 ENSP00000364304 pep:known-ccds chromosome:NCBI36:6:32114072:3211... 48 2e-05 ENSP00000372812 pep:known chromosome:NCBI36:c6_QBL:32106592:3210... 48 2e-05 ENSP00000347011 pep:known chromosome:NCBI36:c6_COX:32101901:3210... 48 2e-05 ENSP00000263552 pep:known-ccds chromosome:NCBI36:7:139124668:139... 46 7e-05 >ENSP00000346887 pep:known-ccds chromosome:NCBI36:7:99263572:99302109:1 gene:ENSG00000021461 transcript:ENST00000354829 CCDS5676.1 Length = 503 Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 12/215 (5%) Query: 209 LDRTLRERIRRYRKRPVDARAGLLQRLATAGPPGSPALSEDEIVGHANVMFVSSTEPVAM 268 ++R R++ +K VD ++ + ALS+ E+V + ++ ++ + + Sbjct: 253 IERMKESRLKDKQKHRVDFFQQMIDSQNSKETKSHKALSDLELVAQSIIIIFAAYDTTST 312 Query: 269 SXXXXXXXXXXXPDLRRALRAEI----ADRASMPASTNG---ASWLENVVNETLRLLTPN 321 + PD+++ L+ EI ++A P + + +L+ VVNETLRL Sbjct: 313 TLPFIMYELATHPDVQQKLQEEIDAVLPNKA--PVTYDALVQMEYLDMVVNETLRLFPVV 370 Query: 322 ALMVRATTRAVSLQGVALPARCEIVVCPFLAHREAKPFPDPHAFSPSRWETARPSP---Y 378 + + R + + + GV +P ++V + H + K + +P F P R+ Y Sbjct: 371 SRVTRVCKKDIEINGVFIPKGLAVMVPIYALHHDPKYWTEPEKFCPERFSKKNKDSIDLY 430 Query: 379 EYFPFGAGGHFCAGRNLALSLIREVLSTLLSRFDF 413 Y PFGAG C G AL+ I+ + L F F Sbjct: 431 RYIPFGAGPRNCIGMRFALTNIKLAVIRALQNFSF 465 >ENSP00000222982 pep:known-ccds chromosome:NCBI36:7:99083759:99115557:-1 gene:ENSG00000106258 transcript:ENST00000222982 CCDS5672.1 Length = 502 Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 15/250 (6%) Query: 173 LAFLLSAYFTLRREASSLNARDPLLYRDELIGVGQQLDRTLRERIRRYRKRPVDARAGLL 232 L+ +L + T EA +++ L +D + + + ++R + R+ +K +D ++ Sbjct: 221 LSIILFPFLTPVFEALNVS----LFPKDTINFLSKSVNRMKKSRLNDKQKHRLDFLQLMI 276 Query: 233 QRLATAGPPGSPALSEDEIVGHANVMFVSSTEPVAMSXXXXXXXXXXXPDLRRALRAEIA 292 + ALS+ E+ + + + E + PD+++ L+ EI Sbjct: 277 DSQNSKETESHKALSDLELAAQSIIFIFAGYETTSSVLSFTLYELATHPDVQQKLQKEID 336 Query: 293 DRASMPA-------STNGASWLENVVNETLRLLTPNALMVRATTRAVSLQGVALPARCEI 345 A +P + +L+ VVNETLRL + R + V + GV +P + Sbjct: 337 --AVLPNKAPPTYDAVVQMEYLDMVVNETLRLFPVAIRLERTCKKDVEINGVFIPKGSMV 394 Query: 346 VVCPFLAHREAKPFPDPHAFSPSRWETARPS--PYEYFPFGAGGHFCAGRNLALSLIREV 403 V+ + H + K + +P F P R+ + S PY Y PFG G C G AL ++ Sbjct: 395 VIPTYALHHDPKYWTEPEEFRPERFSKKKDSIDPYIYTPFGTGPRNCIGMRFALMNMKLA 454 Query: 404 LSTLLSRFDF 413 L +L F F Sbjct: 455 LIRVLQNFSF 464 >ENSP00000368975 pep:known chromosome:NCBI36:7:99263602:99301564:1 gene:ENSG00000021461 transcript:ENST00000379654 Length = 393 Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 12/219 (5%) Query: 205 VGQQLDRTLRERIRRYRKRPVDARAGLLQRLATAGPPGSPALSEDEIVGHANVMFVSSTE 264 + ++R R++ +K VD ++ + ALS+ E+V + ++ ++ + Sbjct: 139 LKNSIERMKESRLKDKQKHRVDFFQQMIDSQNSKETKSHKALSDLELVAQSIIIIFAAYD 198 Query: 265 PVAMSXXXXXXXXXXXPDLRRALRAEI----ADRASMPASTNG---ASWLENVVNETLRL 317 + + PD+++ L+ EI ++A P + + +L+ VVNETLRL Sbjct: 199 TTSTTLPFIMYELATHPDVQQKLQEEIDAVLPNKA--PVTYDALVQMEYLDMVVNETLRL 256 Query: 318 LTPNALMVRATTRAVSLQGVALPARCEIVVCPFLAHREAKPFPDPHAFSPSRWETARPSP 377 + + R + + + GV +P ++V + H + K + +P F P R+ Sbjct: 257 FPVVSRVTRVCKKDIEINGVFIPKGLAVMVPIYALHHDPKYWTEPEKFCPERFSKKNKDS 316 Query: 378 ---YEYFPFGAGGHFCAGRNLALSLIREVLSTLLSRFDF 413 Y Y PFGAG C G AL+ I+ + L F F Sbjct: 317 IDLYRYIPFGAGPRNCIGMRFALTNIKLAVIRALQNFSF 355 >ENSP00000222382 pep:known-ccds chromosome:NCBI36:7:99263572:99302109:1 gene:ENSG00000021461 transcript:ENST00000222382 CCDS5675.1 Length = 504 Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 13/216 (6%) Query: 209 LDRTLRERIRRYRKRPVDARAGLLQRLATAGPPGSPALSEDEIVGHANVMFVSSTEPVAM 268 ++R R++ +K VD ++ + ALS+ E+V + ++ ++ + + Sbjct: 253 IERMKESRLKDKQKHRVDFFQQMIDSQNSKETKSHKALSDLELVAQSIIIIFAAYDTTST 312 Query: 269 SXXXXXXXXXXXPDLRRALRAEI----ADRASMPASTNG---ASWLENVVNETLRLLTPN 321 + PD+++ L+ EI ++A P + + +L+ VVNETLRL Sbjct: 313 TLPFIMYELATHPDVQQKLQEEIDAVLPNKA--PVTYDALVQMEYLDMVVNETLRLFPVV 370 Query: 322 ALMVRATTRAVSLQGVALPARCEIVVCPFLAHREAKPFPDPHAFSP-SRWETARPSP--- 377 + + R + + + GV +P ++V + H + K + +P F P SR+ Sbjct: 371 SRVTRVCKKDIEINGVFIPKGLAVMVPIYALHHDPKYWTEPEKFCPESRFSKKNKDSIDL 430 Query: 378 YEYFPFGAGGHFCAGRNLALSLIREVLSTLLSRFDF 413 Y Y PFGAG C G AL+ I+ + L F F Sbjct: 431 YRYIPFGAGPRNCIGMRFALTNIKLAVIRALQNFSF 466 >ENSP00000346607 pep:known chromosome:NCBI36:7:99083437:99219700:-1 gene:ENSG00000160868 transcript:ENST00000354593 Length = 353 Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 12/231 (5%) Query: 207 QQLDRTLRERIRRYRKRPVDARAGLLQRLATAGPPGSPALSEDEIVGHANVMFVSSTEPV 266 + + R R+ +K VD ++ + ALS+ E+V + + + E Sbjct: 101 KSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETT 160 Query: 267 AMSXXXXXXXXXXXPDLRRALRAEIADRASMPA-------STNGASWLENVVNETLRLLT 319 + PD+++ L+ EI A +P + +L+ VVNETLRL Sbjct: 161 SSVLSFIMYELATHPDVQQKLQEEI--DAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFP 218 Query: 320 PNALMVRATTRAVSLQGVALPARCEIVVCPFLAHREAKPFPDPHAFSPSRWETARP---S 376 + R + V + G+ +P +++ + HR+ K + +P F P R+ Sbjct: 219 IAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNID 278 Query: 377 PYEYFPFGAGGHFCAGRNLALSLIREVLSTLLSRFDFVLDGEQSIDWRIHI 427 PY Y PFG+G C G AL ++ L +L F F E I ++ + Sbjct: 279 PYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSL 329 >ENSP00000274118 pep:known chromosome:NCBI36:4:187349972:187371605:1 gene:ENSG00000145476 transcript:ENST00000274118 Length = 510 Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 9/195 (4%) Query: 226 DARAGLLQRLATAGPPGSPALSEDEIVGHANVMFVSSTEPVAMSXXXXXXXXXXXPDLRR 285 + R L L + LS ++I + + A + P++++ Sbjct: 279 NKRRAFLDLLLSVTDDEGNRLSHEDIREEVDTFMFEGHDTTAAAINWSLYLLGSNPEVQK 338 Query: 286 ALRAEIAD---RASMPASTNGAS---WLENVVNETLRLLTPNALMVRATTRAVSLQGVAL 339 + E+ D ++ PA+ +LE V+ ETLRL L R+ + + G + Sbjct: 339 KVDHELDDVFGKSDRPATVEDLKKLRYLECVIKETLRLFPSVPLFARSVSEDCEVAGYRV 398 Query: 340 PARCEIVVCPFLAHREAKPFPDPHAFSPSRW--ETARP-SPYEYFPFGAGGHFCAGRNLA 396 E V+ P+ HR+ + FP+P F P R+ E A+ PY Y PF AG C G+ A Sbjct: 399 LKGTEAVIIPYALHRDPRYFPNPEEFQPERFFPENAQGRHPYAYVPFSAGPRNCIGQKFA 458 Query: 397 LSLIREVLSTLLSRF 411 + + +LS +L F Sbjct: 459 VMEEKTILSCILRHF 473 >ENSP00000337915 pep:known-ccds chromosome:NCBI36:7:99192540:99219744:-1 gene:ENSG00000160868 transcript:ENST00000336411 CCDS5674.1 Length = 503 Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 12/231 (5%) Query: 207 QQLDRTLRERIRRYRKRPVDARAGLLQRLATAGPPGSPALSEDEIVGHANVMFVSSTEPV 266 + + R R+ +K VD ++ + ALS+ E+V + + + E Sbjct: 251 KSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETT 310 Query: 267 AMSXXXXXXXXXXXPDLRRALRAEIADRASMPA-------STNGASWLENVVNETLRLLT 319 + PD+++ L+ EI A +P + +L+ VVNETLRL Sbjct: 311 SSVLSFIMYELATHPDVQQKLQEEI--DAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFP 368 Query: 320 PNALMVRATTRAVSLQGVALPARCEIVVCPFLAHREAKPFPDPHAFSPSRWETARP---S 376 + R + V + G+ +P +++ + HR+ K + +P F P R+ Sbjct: 369 IAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNID 428 Query: 377 PYEYFPFGAGGHFCAGRNLALSLIREVLSTLLSRFDFVLDGEQSIDWRIHI 427 PY Y PFG+G C G AL ++ L +L F F E I ++ + Sbjct: 429 PYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSL 479 >ENSP00